Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_024134.1 Length=139020 Score E Sequences producing significant alignments: (Bits) Value seq33536 109 5e-19 >seq33536 Length=1950 Score = 109 bits (120), Expect = 5e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 88117 TGAATACCTCACCAACAGTTTCCATCAGCCAGTATGGATCAATAGTTCACCTTTTGATAA 88176 ||| || |||| ||| ||||| |||||||||||||| | ||||| || | || || Sbjct 1274 TGATTATATCACTAACTCATTCCACCAGCCAGTATGGATTGAAAGTTCTCCGCTAGAGAA 1333 Query 88177 GTGGAAGTATGAAGAAGGTTTTGCTATGATCTCTTCTGGTGGCAACATTGGATATATAGA 88236 ||||| ||||||||||||||||| | | | ||| || || ||| | ||| | || Sbjct 1334 ATGGAATTATGAAGAAGGTTTTGCATTCTTGAGTAATGGCGGGAATATTAGTTATGTTGA 1393 Query 88237 GACACCTAACCTGAAAAACAACCTGGATGCTTTAGAGGCTCTTGTTGACTTCGGGTATAA 88296 ||||| ||||| ||||| || | || ||||| || | || || | | ||| | Sbjct 1394 AACACCAAACCTTAAAAATAATATAACAGCCTTAGAAGCATTGGTCGATTATGCATATGA 1453 Query 88297 ACACATTATGTATTTTGGTATTAACCAACCTGTGGATAAATGT 88339 || | ||| ||||||||||||||||| || ||||||||| Sbjct 1454 ACGTGTACCGTACTTTGGTATTAACCAACCAGTAGATAAATGT 1496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444325808868800