Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq10303 141 1e-28 >seq10303 Length=766 Score = 141 bits (156), Expect = 1e-28 Identities = 162/215 (75%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 41340 TTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGT 41399 |||| ||| | | |||| |||||||||||||||| |||||||||||||| |||| || | Sbjct 751 TTCGTGCATTAGATTCTGAAATCCGTGGTGGTGACGCAGTACATACAGGTTTGATTCCAT 692 Query 41400 TC-TGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGT 41458 || | | || | | | | | |||||||| ||||||||||||||||||||||||||| Sbjct 691 TCCTTTCAGCAAGTACTAAAA-CTGTTAAATCATGTTCACAAGGTGGCGTTCGTGGTGGT 633 Query 41459 GCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAA 41518 || ||||| | | | || | |||||| | ||| |||||||||| | || || || Sbjct 632 GCAGCAACTATTCACTTCCCACTATGGCATCTAGAATTTGAAAACCTTGTAGTACTAAAG 573 Query 41519 AACAACAAAGGTGTTGAGAATAACCGCATTCGTCA 41553 || |||||||| ||| |||||| ||||||| Sbjct 572 AATAACAAAGGAACTGAATTTAACCGTGTTCGTCA 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569493457041360