Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq30457 105 4e-18 >seq30457 Length=12079 Score = 105 bits (116), Expect = 4e-18 Identities = 147/205 (72%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 20001 TACCACCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAGT 20060 ||||||| || |||| | | ||| ||||| || || || ||| | || || Sbjct 2068 TACCACCCTGTCATAGTTTCTCTCAGTTCTTCGTAGTGGACGGCAAACTTTCCTGTACTC 2127 Query 20061 TGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCTT 20120 | |||||||| ||||| || ||||| || |||||||||||||| ||||| ||| || Sbjct 2128 TATATCAACGTAGTGCAGATTTATTCCTAGGTGTTCCATTTAACATTGCTAGTTACTCTC 2187 Query 20121 TACTTACACACTTAGTTGCATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTTTGGGTTG 20180 |||| || || | | || || ||||| || | ||||||||||| ||||| ||| Sbjct 2188 TACTAACTCATATGTTAGCTCAAGTTTGTGGTCTAGAAGTTGGTGAGTTCATTTGGATTG 2247 Query 20181 GTGGTGATTGCCACATTTACTCAAA 20205 |||||||||| ||||| ||| |||| Sbjct 2248 GTGGTGATTGTCACATCTAC-CAAA 2271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318724323795086