Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq44731 114 2e-19 >seq44731 Length=5866 Score = 114 bits (126), Expect = 2e-19 Identities = 121/157 (77%), Gaps = 7/157 (4%) Strand=Plus/Minus Query 1456122 GAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG--GCCTCGACACTTTGCCG 1456179 ||| ||||||||||||||| ||||||||||| | | || | ||||| ||| |||| Sbjct 3600 GAAGAAGGCCGACTGGGCGCTGAAGTGGATCGCCGACGAAGAGGCCTC----CTTCGCCG 3545 Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238 || | || ||| || ||||| |||||||| || || ||||| || ||| | ||| Sbjct 3544 AGAGAGTCATCGCATTCGCCGCCGTCGAGGGAATATTCTTCTCCGGGTCCTTCGCCTCCA 3485 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||||||||||||||||| || |||||||| || Sbjct 3484 TCTTTTGGCTCAAGAAGCGCGGGCTTATGCCCGGGCT 3448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7170694404681332