Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq10303 105 8e-18 >seq10303 Length=766 Score = 105 bits (116), Expect = 8e-18 Identities = 201/294 (68%), Gaps = 4/294 (1%) Strand=Plus/Minus Query 148037 ACACACAGGTGTTGTCCCATTCCT--CAAAAAATTTGAAAGCACTGTCAGATGTTGTACT 148094 ||| |||||| | | |||||||| || || | ||| ||||| | || ||| | Sbjct 711 ACATACAGGTTTGATTCCATTCCTTTCAGCAAGTACTAAA--ACTGTTAAATCATGTTCA 654 Query 148095 CAGAATGGCATCCGAGGTGGATCAGCAACTGTCCACTTCCCAATCTGGCACCAAGAAATA 148154 || |||| | || ||||| |||||||| | ||||||||| | ||||| | |||| | Sbjct 653 CAAGGTGGCGTTCGTGGTGGTGCAGCAACTATTCACTTCCCACTATGGCATCTAGAATTT 594 Query 148155 GAGGACATCATTGTTCTCAAGAACAATAAAGGTACGGAGGATAATCGTGTCCGAAAACTT 148214 || || | | || || ||||| || ||||| || || ||| ||||| || || | Sbjct 593 GAAAACCTTGTAGTACTAAAGAATAACAAAGGAACTGAATTTAACCGTGTTCGTCAAAGT 534 Query 148215 GACTACTCAATCCAAATTTCAAAACTTTTCTACGAACGTTTCATCCAGAATGGAGAGATT 148274 ||||| | ||||| | |||||| | || |||||| | | | |||| | ||| Sbjct 533 GACTATTGCTTCCAAGTAAACAAACTTCTTTATGAACGTCTAACTAAACGTGGAAATATT 474 Query 148275 AGCCTCTTCTCACCGCATGACGTACCAGGTCTCTATGATGCTTTTGGTACTGAT 148328 | ||||||||||| || ||||| ||||| |||||||| || || ||||| Sbjct 473 ACTTTCTTCTCACCGTCAGATGTACCGGGTCTATATGATGCATTCTGTGCTGAT 420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572495485639200