Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_027356.1 Length=108065 Score E Sequences producing significant alignments: (Bits) Value seq27634 100 2e-16 >seq27634 Length=378 Score = 100 bits (110), Expect = 2e-16 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 40678 GTTACGCATACCGTATTTCAGAATATCTGCACGCAGAGATTCCCAATCCATTTCTAGACC 40737 |||||| || ||||||||| |||||||||||| |||| |||||||||||||| ||| | Sbjct 73 GTTACGAATGCCGTATTTCGCAATATCTGCACGTAGAGTTTCCCAATCCATTTTTAGTTC 132 Query 40738 --TACTGATACCAGCTCATCAACAGTTTTCTTGTACGTGTCGATTACCAGAGTTCCTTTG 40795 ||| ||| || || ||||| | || ||||| || |||||| || || | | Sbjct 133 AGTAC--CTACTAGTTCGTCAACTGACTTTTTGTATGTATCGATTGGAAGTACACCATCG 190 Query 40796 G-ATGGTTTAGTACGATTAAACCATTCACATGCACCTTGCTCTTTGGCTAGACGTACAG- 40853 | | |||||| | | ||||||||||||| |||| |||||| || | |||||| Sbjct 191 GCGTATTTTAGTTTG-TCAAACCATTCACATTTGCCTTTCTCTTTAGCCAACTGTACAGA 249 Query 40854 AGGCTTTATGCAGGAAGTAAGACAGTTTTTCAGC 40887 || ||| || ||| |||||||| | |||||| Sbjct 250 AGACTTGAT-TAGGTAGTAAGACCATGCTTCAGC 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345372338548996