Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq17487 87.8 2e-12 >seq17487 Length=3481 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/163 (72%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 27107 ACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTT 27166 ||| ||| | || |||||||| ||||| || || | ||||| || || |||||| Sbjct 155 ACCAGCGAAGATCAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGGATCTTAGC 214 Query 27167 TTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAG 27226 || | |||| | ||||| | ||| ||||| || ||||| |||| || || || || Sbjct 215 CTTGACATTTTCGATGGTGTCGGAGGCCTCAACCTCGAGAGTGATAGTCTTTCCGGTGAG 274 Query 27227 AGTTTTCACAAAGATTTGCATAGCTGCTA-AAAATTTATTAAA 27268 |||||| || ||||||||||| |||| | ||||| |||| || Sbjct 275 AGTTTTGACGAAGATTTGCATCGCTGAAAGAAAATATATTGAA 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424552270570032