Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2257 136 4e-27 >seq2257 Length=6083 Score = 136 bits (150), Expect = 4e-27 Identities = 204/285 (72%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 53501 CCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGC 53560 || |||||||| |||| ||||||||| || || ||||| | ||||| || ||||| Sbjct 2628 CCCATGCTCCGTGTCTACAACAACACCGCTCGCTACGTGGATCAGGGAGGCAACAAGCGT 2687 Query 53561 AAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAG 53620 ||| | |||||||||||||||||||| |||||||| || || | ||||| | | Sbjct 2688 CCGGGAGCCTTCGCCATCTACCTCGAGCCCTGGCACGCGGATATCTTTGAGTTCGTGTCG 2747 Query 53621 CTGCGTCTGAA-TCAGGG--TGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTG 53677 ||| | ||| | ||| ||| || |||| | || ||| || ||||| || || Sbjct 2748 CTGAGGAAGAACACTGGGCCTGAGGAGGAGA-GGGC--CCGCGATCTGTTCCTGGCCCTC 2804 Query 53678 TGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGC 53737 ||| ||||||| ||||||||| | | ||| | | |||| || ||| |||||||||| Sbjct 2805 TGGGTTCCGGATCTCTTCATGAAGAGGGTTTCGGATGACGCCGACTGGGCCCTGATGTGC 2864 Query 53738 CCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782 || |||||||||||| || | | |||| || ||||||||| Sbjct 2865 CCCCGCGAGTGCCCCGGACTGGACGACGTCTGGGGAGAGGAGTTT 2909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546711289002800