Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1981 93.3 3e-14 >seq1981 Length=2930 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 30256 CTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTC---GAAGCCCCTCTT 30312 |||||| ||||| || ||||||| || || ||| || | || |||||| || Sbjct 1943 CTGGAATCCGTAGACGGGTCCCAAATCACCGACTT---TGCGATCTGTGAAGCCTTGTTT 1999 Query 30313 GTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTC 30372 ||| | || || || || ||||| || ||||||||||| || ||||| || ||| Sbjct 2000 GTCGAGGAACTCCCTCGATCCGTTCGCATCCCAGATCTTGACTCCCTTGTCGTGGAGACG 2059 Query 30373 TTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAA 30432 |||| || ||| ||| | | |||||||| |||||||||||| || | ||||| | Sbjct 2060 TTTGCTGTCGGTGTCTCCTTTCATGAACCACAACAGCTCCTCCACCACTCCTTTCCAGTA 2119 Query 30433 GACCCTCTTGGTCGTGAGGAGGGGAA 30458 ||| | ||| ||||| || || |||| Sbjct 2120 GACTCGCTTCGTCGTCAGCAGAGGAA 2145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405945018516312