Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq10303 107 2e-18 >seq10303 Length=766 Score = 107 bits (118), Expect = 2e-18 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 147757 TTAATAAGACGTTCTAACATCAGGTCATTAATCTGGACGCCATAATCTAAGTGACGAATA 147816 ||| | |||||||| | | || | || | |||| || ||| || ||||||| | Sbjct 487 TTAGTTAGACGTTCATAAAGAAGTTTGTTTACTTGGAAGCAATAGTCACTTTGACGAACA 546 Query 147817 CGGTTCTCGTCTACACCTTTATTGTTTTTCAGAACGAGAAGGTTTTCGACTTCTAAATGC 147876 ||||| || ||||| || || || || || | ||||||||| | ||||| |||| Sbjct 547 CGGTTAAATTCAGTTCCTTTGTTATTCTTTAGTACTACAAGGTTTTCAAATTCTAGATGC 606 Query 147877 CAAATTGGATAGTACAATGTTGCTGCACCACCACGTACACCACCTTGGGAACATGATTTA 147936 || | ||| ||| | ||||||||||||||||| || |||||||| |||||||||||| Sbjct 607 CATAGTGGGAAGTGAATAGTTGCTGCACCACCACGAACGCCACCTTGTGAACATGATTTA 666 Query 147937 ACAG 147940 |||| Sbjct 667 ACAG 670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567805415401680