Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_028820.1 Length=162101 Score E Sequences producing significant alignments: (Bits) Value seq41502 109 6e-19 >seq41502 Length=4250 Score = 109 bits (120), Expect = 6e-19 Identities = 182/260 (70%), Gaps = 5/260 (2%) Strand=Plus/Minus Query 63312 AACGCTCTAAAGCTAATACACATGCTTCTTCATATACACCAGCTAACTGAATTTCTTTAG 63371 |||| |||| || | |||||| | ||||| ||||| || ||| || || | | | Sbjct 1649 AACGTTCTAGTGCAAGTACACAAGTCTCTTCGTATACTCCTAGTAATTGT-TTAATCTCG 1591 Query 63372 GTA-GAGCCATGAACTTCTCTTTAGAAGTCATTACTTGAGAATCATCTTTCATGTAATAT 63430 | | |||| | ||||||||||||| |||||||| | | ||||||||||||| | | Sbjct 1590 GAAAGAGCGAAGAACTTCTCTTTATCTACCATTACTTCCGCACCATCTTTCATGTACTCT 1531 Query 63431 TTGTATGCTGGCTGATCAATTAATGCAATGGCTTCATGAATTGTATCATGGTCGTATGTA 63490 ||||| || || ||| || | ||||| || |||||||| ||||||||||| || || Sbjct 1530 TTGTACGCAGGTGCATCCATAATAGCAATCGCCTCATGAATAGTATCATGGTCATAGATA 1471 Query 63491 TA---GATATCATCTTTAAAGAATGCATCTTTAGAAACATCTAACACAGGATGTGCATAA 63547 || | ||||||| ||||| | ||||| || ||| | || ||||| | ||| Sbjct 1470 TAACCCACTTCATCTTGGAAGAAGGTTTCTTTGGATTGATCAAGTACTGGATGGGTGTAA 1411 Query 63548 CTCAAAGTTTCTTTTTCTCG 63567 | | |||||||| || || Sbjct 1410 TTATACGTTTCTTTCTCACG 1391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518116886682160