Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq10303 104 4e-17 >seq10303 Length=766 Score = 104 bits (114), Expect = 4e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 236266 TAGTCAAGATGACGAATACGGTTTTCTTCAACACCTTTGTTGTTCTTCAGAACTAACAGT 236325 |||||| ||||||| |||||| |||| |||||||| ||||| || |||| || Sbjct 529 TAGTCACTTTGACGAACACGGTTAAATTCAGTTCCTTTGTTATTCTTTAGTACTACAAGG 588 Query 236326 TTTTCAACTTCTAAGTGCCAAATCGGGTAAGTTAG-AGTCGCAGCACCACCACGTACACC 236384 ||||||| ||||| ||||| | ||| |||| | ||| || ||||||||||| || || Sbjct 589 TTTTCAAATTCTAGATGCCATAGTGGG-AAGTGAATAGTTGCTGCACCACCACGAACGCC 647 Query 236385 ACCTTGAGAACACGATTTAAC 236405 |||||| ||||| |||||||| Sbjct 648 ACCTTGTGAACATGATTTAAC 668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793021501210880