Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_028840.1 Length=111751 Score E Sequences producing significant alignments: (Bits) Value seq27634 93.3 3e-14 >seq27634 Length=378 Score = 93.3 bits (102), Expect = 3e-14 Identities = 155/216 (72%), Gaps = 10/216 (5%) Strand=Plus/Minus Query 82666 GGCTGAAAAACTGTCTTACTTCCTGCATAAAGCCT-CTGTACGCCTAGCTAAAGAACAGG 82724 ||||||| | |||||||| ||| || ||| || |||||| | |||||||| | | Sbjct 283 GGCTGAAGCATGGTCTTACTACCTA-ATCAAGTCTTCTGTACAGTTGGCTAAAGAGAAAG 225 Query 82725 GTGCATGTGAGTGGTTTGATCGTACTAAAC--CGTCTAAAGGAATTCTGGTAATCGACAC 82782 | |||||| |||||||| | |||||| || | | || | || |||||| || Sbjct 224 GCAAATGTGAATGGTTTGA-CAAACTAAAATACGCCGAT-GGTGTACTTCCAATCGATAC 167 Query 82783 GTACAAGAAAACTGTTGATGAACTGGTATCCGTA--GGTCTAGAAATGGATTGGGAGTCT 82840 ||||| || | ||||| ||||| ||| ||| | ||| ||||||||||||| || Sbjct 166 ATACAAAAAGTCAGTTGACGAACTAGTAG--GTACTGAACTAAAAATGGATTGGGAAACT 109 Query 82841 CTGCGTGCAGATATTCTGAAATATGGTATGCGTAAC 82876 || |||||||||||| |||||| || || |||||| Sbjct 108 CTACGTGCAGATATTGCGAAATACGGCATTCGTAAC 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357156931516352