Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq10303 147 2e-30 seq30457 100 3e-16 >seq10303 Length=766 Score = 147 bits (162), Expect = 2e-30 Identities = 163/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 77208 TGACGAATACGGTTATTCTCAACACCTTTGTTGTTTTTCAGAACCAGCAGGTTTTCAACT 77267 ||||||| ||||||| ||| |||||||| || || || || | |||||||||| | Sbjct 538 TGACGAACACGGTTAAATTCAGTTCCTTTGTTATTCTTTAGTACTACAAGGTTTTCAAAT 597 Query 77268 TCCAAATGCCAGATCGGATAATACAACGTTGCAGCACCACCACGAACGCCACCTTGTGAA 77327 || | |||||| | || | | | ||||| ||||||||||||||||||||||||||| Sbjct 598 TCTAGATGCCATAGTGGGAAGTGAATAGTTGCTGCACCACCACGAACGCCACCTTGTGAA 657 Query 77328 CAGGATTTAACCGCTGTCTGAATATGTTTCCA-GAACGGGATCACGCCTGTATGTACTGC 77386 || |||||||| | | | | | || | | ||| || |||| |||||||||||||| Sbjct 658 CATGATTTAACAG-TTTTAGTACTTGCTGAAAGGAATGGAATCAAACCTGTATGTACTGC 716 Query 77387 TTCACCACCACGGATTTTAGAACCCATTGCGCGAA 77421 |||||||||||||||| |||| | | ||| |||| Sbjct 717 GTCACCACCACGGATTTCAGAATCTAATGCACGAA 751 >seq30457 Length=12079 Score = 100 bits (110), Expect = 3e-16 Identities = 182/264 (69%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 78397 TCTTTTGCTTGTTCAATTGCGTTTTTGTAGATATGAACATCACCACCTGTCCATACCAGA 78456 ||||| ||||||| | ||||| |||||| ||| ||||||||| |||| | | Sbjct 2293 TCTTTAACTTGTTCTACGTGGTTTTGGTAGATGTGACAATCACCACCAATCCAAATGAAC 2234 Query 78457 TCACCAACTTCGTACCCGCAAATATCAGCGATAATATGCGTCAGGAGAGCGTAGGAGGCG 78516 ||||||||||| || |||| | ||| | ||||| || || |||| ||| || Sbjct 2233 TCACCAACTTCTAGACCACAAACTTGAGCTAACATATGAGTTAGTAGAGAGTAACTAGCA 2174 Query 78517 ATATTGAACGGCAACCCTAAGAAGACATCAACCGAACGCTGATACCACTGTAGA-GACAG 78575 || || || || | |||| ||| | ||| | ||| ||||| | ||| | || || Sbjct 2173 ATGTTAAATGGAACACCTAGGAATAAATCTGCACTACGTTGATA-TAGAGTACAGGAAAG 2115 Query 78576 TTTACCGTTGATTACGACGAACTGGAAGAAACAGTGACACGGACGCAATGCCATTTTATC 78635 ||| |||| | ||||| |||||| |||||| ||||| || | | ||||| ||||| Sbjct 2114 TTTGCCGTCCACTACGAAGAACTGAGAGAAACTATGACAGGGTGGTAGAGCCATCTTATC 2055 Query 78636 CAGATCAACAGGGTTCCATGCGGA 78659 |||||| | ||||||||| || Sbjct 2054 TAGATCACCCACGTTCCATGCAGA 2031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567949282586880