Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_029042.1 Length=156833 Score E Sequences producing significant alignments: (Bits) Value seq22710 104 2e-17 >seq22710 Length=1561 Score = 104 bits (114), Expect = 2e-17 Identities = 203/292 (70%), Gaps = 11/292 (4%) Strand=Plus/Minus Query 104945 CGTTTCTATGTTTCATTTGCGTGTTCTTGGGCTTTCATGCAATTCCTCAACAAAATGGAA 105004 || ||||||||||||||||| ||||||||||||||| ||| | ||| ||||||| Sbjct 749 CGCTTCTATGTTTCATTTGCATGTTCTTGGGCTTTC--GCAGAGAATAAAC-TAATGGAA 693 Query 105005 GGCAACGCTAAAATCATCCGTCAGATTGCTCGTGATGAGCA-AGACCATTTGATCCTCAC 105063 || |||||||| |||||||||| ||| ||||| ||| | || || | || || Sbjct 692 GGGAACGCTAAGATCATCCGTCTAATTTGCCGTGACGAGAACTTACACTTAGCAGCT-AC 634 Query 105064 CCAAACACTGCTGAACCGTCTAC-CACTGATG--GACCCTGATTTTGCCATTATCAGAGA 105120 ||||| || || ||| ||| || | | || | || |||| | || ||| Sbjct 633 CCAAA---TGATGCTACGTTTACTCAAGAAAGAAGATGCAGACTTTGTTAAAATTGCAGA 577 Query 105121 AGAACTGCGTGGCGAAATGACCCAGATGTATGTGGATGTGGTCAACCAAGAGAAAGAGTG 105180 |||| | | |||| | || |||| | |||||| | |||||| ||||||| Sbjct 576 AGAATGCCACGACGAAGTACAACAAATGTTTATGGATGCTATTCGCCAAGAAGAAGAGTG 517 Query 105181 GGCGAACTATCTGTTCAAAGACGGATCCATGCTGGGTCTGAACGCAAATATC 105232 ||| ||||||| ||||||||||| ||||| | ||| |||||||| | ||| Sbjct 516 GGCTGACTATCTATTCAAAGACGGTTCCATTATTGGTTTGAACGCACAAATC 465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501274834868080