Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_031042.1 Length=111325 Score E Sequences producing significant alignments: (Bits) Value seq27634 100 2e-16 >seq27634 Length=378 Score = 100 bits (110), Expect = 2e-16 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 18128 GTTACGCATACCATATTTCAGAATATCTGCACGTAGAGACTCCCAATCCATTTCTAGACC 18187 |||||| || || |||||| ||||||||||||||||| ||||||||||||| ||| | Sbjct 73 GTTACGAATGCCGTATTTCGCAATATCTGCACGTAGAGTTTCCCAATCCATTTTTAGTTC 132 Query 18188 TACAGATACCAGTTCATCAACAGTTTTCTTGTACGTGTCGATTACCAGAATTCCTTTAG- 18246 | ||| ||||| ||||| | || ||||| || |||||| || | || | | Sbjct 133 AGTACCTACTAGTTCGTCAACTGACTTTTTGTATGTATCGATTGGAAGTACACCATCGGC 192 Query 18247 ATGGTTTAGTACGATCAAACCACTCACATGCACCCTGTTCTTTAGCTAGGCGTACAG-AG 18305 | |||||| | |||||||| |||||| || | |||||||| | |||||| || Sbjct 193 GTATTTTAGTTTG-TCAAACCATTCACATTTGCCTTTCTCTTTAGCCAACTGTACAGAAG 251 Query 18306 GCTTTATGCAGGAAGTAAGACAGTTTTTCAGCC 18338 ||| || ||| |||||||| | ||||||| Sbjct 252 ACTTGAT-TAGGTAGTAAGACCATGCTTCAGCC 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355794957396956