Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq10303 147 3e-30 >seq10303 Length=766 Score = 147 bits (162), Expect = 3e-30 Identities = 163/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 43559 TTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGT 43618 |||| ||| | | |||| |||||||||||||||| |||||||||||||| |||| || | Sbjct 751 TTCGTGCATTAGATTCTGAAATCCGTGGTGGTGACGCAGTACATACAGGTTTGATTCCAT 692 Query 43619 TC-TGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGT 43677 || | | || | | | | | |||||||| ||||||||||||||||||||||||||| Sbjct 691 TCCTTTCAGCAAGTACTAAAA-CTGTTAAATCATGTTCACAAGGTGGCGTTCGTGGTGGT 633 Query 43678 GCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAA 43737 || ||||| | | | || | |||||| | ||| |||||||||| | || || || Sbjct 632 GCAGCAACTATTCACTTCCCACTATGGCATCTAGAATTTGAAAACCTTGTAGTACTAAAG 573 Query 43738 AACAACAAAGGTGTTGAGAATAACCGTATTCGTCA 43772 || |||||||| ||| ||||||| ||||||| Sbjct 572 AATAACAAAGGAACTGAATTTAACCGTGTTCGTCA 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576041012492240