Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq30457 131 6e-26 >seq30457 Length=12079 Score = 131 bits (144), Expect = 6e-26 Identities = 194/275 (71%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 52064 TCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATTTGGATGATATGGCGTTGGCTCC 52123 ||| || || ||| | ||||| ||||| ||||||||| | ||| | ||||| | | || Sbjct 2015 TCGCCGCCATATTCTATCTGCATGGAACGTGGGTGATCTAGATAAGATGGCTCTACCACC 2074 Query 52124 CTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCA 52183 ||| |||| | | || |||| |||| || || || ||||| || | | ||||| Sbjct 2075 CTGTCATAGTTTCTCTCAGTTCTTCGTAGTGGACGGCAAACTTTCCTGTACTCTATATCA 2134 Query 52184 GCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGAC 52243 || ||| || | ||| | || ||||| ||||||||||| || || || | || || Sbjct 2135 ACGTAGTGCAGATTTATTCCTAGGTGTTCCATTTAACATTGCTAGTTACTCTCTACTAAC 2194 Query 52244 GCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATTCATTTGGACTGGTGGCGA 52303 ||| || | |||| || ||| || || |||||||| |||||||||| |||||| || Sbjct 2195 TCATATGTTAGCTCAAGTTTGTGGTCTAGAAGTTGGTGAGTTCATTTGGATTGGTGGTGA 2254 Query 52304 CGTCCATATCTACAACAACCATGTAGATCAGGTTA 52338 || |||||| | ||||| ||||| || |||| Sbjct 2255 TTGTCACATCTACCAAAACCACGTAGAACAAGTTA 2289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189929436221460