Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq30457 91.5 1e-13 >seq30457 Length=12079 Score = 91.5 bits (100), Expect = 1e-13 Identities = 197/293 (67%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 70274 ATTGATCAGATCGAGTGGGTAATTAATGAGATTAAAACTAATCCAAATAGCCGTCGTATG 70333 ||||| || || | ||| ||||| ||| | | |||| ||| |||||| || || Sbjct 1965 ATTGACCAAATAGCGTGTCTAATTGATGGGTTGAAAAATAACCCAAATGATCGCCGCCAT 2024 Query 70334 ATTGTCACGGGGTGGAACCCTCATGAGATTGA--AGATGTAGACCTTCCACCATGTCATA 70391 ||| | | | |||||| ||| | || ||||| | || ||||| ||||||| Sbjct 2025 ATTCTATCTGCATGGAACGTGGGTGATCTAGATAAGATG--GCTCTACCACCCTGTCATA 2082 Query 70392 CACTATTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAGCTATATCAACGTAGTG 70451 | | || ||||| || | || || || ||||| || |||||||||||||||| Sbjct 2083 GTTTCTCTCAGTTCTTCGTAGTGGACGGCAAACTTTCCTGTACTCTATATCAACGTAGTG 2142 Query 70452 CTGACATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCCTTACTTACACATCTTA 70511 | || | || || ||||| ||||| || ||||| || | |||| || ||| | Sbjct 2143 CAGATTTATTCCTAGGTGTTCCATTTAACATTGCTAGTTACTCTCTACTAACTCATATGT 2202 Query 70512 TTGCTGCTGAGTGTGGGTTAGGTGTTGGTGAGTTTGTTTGGACTGGTGGTGAT 70564 | ||| | ||||| ||| ||||||||||| |||||| |||||||||| Sbjct 2203 TAGCTCAAGTTTGTGGTCTAGAAGTTGGTGAGTTCATTTGGATTGGTGGTGAT 2255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335272629057982