Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq81 96.9 3e-15 >seq81 Length=934076 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || ||| | ||||| | || ||||| ||||| ||| ||| ||| || | Sbjct 594891 AATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTTGAAGTCGAAGCCTC 594950 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || | ||| || || || ||||| || | ||| ||| || Sbjct 594951 GGACACAATCGAGAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGACCA 595010 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || ||||| ||||| || ||||||||| |||| ||| | ||| || |||| ||||| Sbjct 595011 GCAGAGACTCATCTTCGCCGGCAAACAATTGGAGGATGGCCGCACTTTGTCCGACTACAA 595070 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||||||||| || |||||| |||| | ||| | || || || Sbjct 595071 CATTCAGAAGGAATCCACCCTTCACTTGGTCCTCCGACTTCGTGGTGG 595118 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || |||||||| | ||| ||| || || ||||| ||||| || ||||||||| |||| Sbjct 596794 GACAAAGAAGGAATCCCCCCAGACCAGCAGAGACTCATCTTCGCCGGCAAACAATTGGAG 596853 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| || |||| ||||| ||||||||||| |||||||| || | || | Sbjct 596854 GATGGCCGCACTTTGTCCGACTACAACATTCAGAAGGAGTCTACTCTCCATCTTGTTCTG 596913 Query 29175 CGATTACGAGGAGG 29188 ||| | || ||||| Sbjct 596914 CGACTTCGTGGAGG 596927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335002914105