Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq81 96.9 3e-15 >seq81 Length=934076 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| || |||| |||||| || ||||| || |||||||||||||||| | Sbjct 595118 CCACCACGAAGTCGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAC 595059 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| |||||||||||||| || |||| ||||| || || || ||| Sbjct 595058 AAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGGGGA 594999 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || || || || || | |||||| | | | ||||| || ||| | Sbjct 594998 ATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATTGTGTCCGAGGCTTCGACT 594939 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 |||| ||||||| | ||||| || | ||||| || || || |||||| Sbjct 594938 TCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAGATCTGCATT 594891 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || | ||| |||| ||| || || || || || || ||||||||||| | Sbjct 596427 TCCTCCTCTGAGACGAAGGACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGA 596368 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || | ||||||||| || || || || |||| |||||||||||||| ||| Sbjct 596367 CAAGGTACGTCCATCTTCCAACTGCTTTCCGGCGAAGATGAGTCTTTGTTGATCTGGGGG 596308 Query 18218 CACGCCTTCCTTATC 18232 | ||||||||||| Sbjct 596307 AATTCCTTCCTTATC 596293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343116958295