Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq109 95.1 1e-14 seq126 86.0 5e-12 >seq109 Length=1818587 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 ||||| || ||||||||||| || | ||| || ||||||| |||||||| ||| | | Sbjct 529722 TCCTTCTGGATGTTGTAATC-GCTCAGTGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAA 529664 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 ||| |||||||||||||| || | | ||||||||| || || ||||| | Sbjct 529663 AATCAAACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 529604 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | || || || | || ||| |||| || || ||||| |||||||||||||| || Sbjct 529603 TTCGATAGTGTCAGAAGCCTCGACTTCGAGGGTGATAGTTTTTCCGGTGAGAGTTTTGAC 529544 Query 48715 AAAAATCTGCATCG 48728 || || ||||||| Sbjct 529543 GAAGATTTGCATCG 529530 >seq126 Length=3090016 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || || |||||||| ||| || | || | ||||||||||||| || | | ||||||| Sbjct 1375436 TCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATTCCTTCCTTG 1375377 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| || || ||||| | |||||||||| || || ||||| || ||| Sbjct 1375376 TCCTGGATCTTGGCCTTGACGTTTTCGATGGTATCGGAAGCTTCGACCTCGAGAGTGATG 1375317 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCG 48728 || || |||||||||||||| || || || ||||||| Sbjct 1375316 GTCTTTCCGGTGAGAGTTTTGACGAAGATTTGCATCG 1375280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250219406191