Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq109 122 8e-23 seq81 111 2e-19 seq126 107 2e-18 >seq109 Length=1818587 Score = 122 bits (134), Expect = 8e-23 Identities = 127/167 (76%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||| ||||||||||| || ||||||||||| Sbjct 530357 GACACCATTGAAAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCCGATCAG 530416 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||||||| | | |||||| || || || |||| | | | | |||||||||| ||| Sbjct 530417 CAGAGACTCATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTCAGCGACTACAAC 530476 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| || || ||| ||||||| |||||| | ||| | ||||| Sbjct 530477 ATCCAAAAGGAGTCGACTCTCCATCTCGTCCTGCGTCTTCGTGGAGG 530523 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| | ||||| || |||| || ||||| | ||| | | Sbjct 529760 ATGCAGATCTTCGTGAAAACGCTCACTGGGAAGACGATTACTCTCGAAGTCGAAGCCTCC 529819 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| ||||| ||||| ||||| || ||||||||||| Sbjct 529820 GACACTATTGAAAACGTCAAAGCTAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAG 529879 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | || ||||| || | ||||||| |||| | |||||| || Sbjct 529880 CAACGTCTGATCTTCGCAGGCAAGCAGTTGGAAGATGGAAGAACGCTGTCCGACTACAAT 529939 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| |||||||| ||||||| |||||| ||||| | ||||| Sbjct 529940 ATCCAAAAGGAATCTACGCTCCATCTCGTCCTGCGACTTCGCGGAGG 529986 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| | || |||||| | |||||| ||||| | || | Sbjct 529532 ATGCAAATCTTCGTCAAAACTCTCACCGGAAAAACTATCACCCTCGAAGTCGAGGCTTCT 529591 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | ||||| ||||| ||||| ||||| || ||||||||||| Sbjct 529592 GACACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAG 529651 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | |||| | |||||| || ||||| || | | | | | ||||| || ||| Sbjct 529652 CAGCGTTTGATTTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACACTGAGCGATTACAAC 529711 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || ||||||||| |||| ||||||| Sbjct 529712 ATCCAGAAGGAATCTACTCTCCACTTGGTCCT 529743 Score = 93.3 bits (102), Expect = 4e-14 Identities = 167/240 (70%), Gaps = 8/240 (3%) Strand=Plus/Minus Query 148242 CCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAA 148301 ||||||| |||||| || |||||| | ||||||||||| || ||||||||| ||| Sbjct 200497 CCTTCGGACTCGTACTTAGTGTAAAGCTTCTCGAATTCTTCTCCCCAGCAATCGTCCAAA 200438 Query 148302 CCGGGACACTCGTCGGGGCACATCAATGACCA-TTTCCCTCCTGTCTTTACCCTCTTCAT 148360 |||||||| || || ||||||| ||||| | || ||| | || |||||||| Sbjct 200437 CCGGGACATTCACGAGGACACATCAGCGACCAGTCGGTATCTTGT-TCGACTCTCTTCAT 200379 Query 148361 AAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCACC 148420 || |||||||| |||||| || | || ||||| ||||| | || |||| ||| Sbjct 200378 GAAAAGATCAGGGATCCACAGAGCCAGAAAGAGATCACGAGCACGCTCCTCTTCGGGACC 200319 Query 148421 CATATTGCGCTTT---AGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGTA 148477 | || |||| ||| | || ||| | ||||||||||| ||||||| ||| Sbjct 200318 ---AGTGTTCTTTCTCAGAGAGCAGAATTCAAAGATATCTGCGTGCCACGGCTCGAGGTA 200262 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | ||||| ||||| ||||| ||||| || ||||||||||| Sbjct 530087 GACACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAG 530146 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || |||| | |||||| || ||||| || | | | | | |||||||| ||| Sbjct 530147 CAGCGTCTGATTTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACATTGAGCGACTACAAC 530206 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| || ||||| |||| ||||||| Sbjct 530207 ATCCAAAAGGAGTCTACCCTCCACTTGGTCCT 530238 >seq81 Length=934076 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | |||||||| | ||||| | ||| | ||| | Sbjct 596701 ATGCAGATCTTCGTCAAGACCCTTACTGGAAAGACCATCACTCTTGAAGTCGAAGCCTCG 596760 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | || || ||||| ||||||||||| || || || || || Sbjct 596761 GACACAATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGAATCCCCCCAGACCAG 596820 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||||||| | || |||||||||| | || |||| | | | |||||| ||| Sbjct 596821 CAGAGACTCATCTTCGCCGGCAAACAATTGGAGGATGGCCGCACTTTGTCCGACTACAAC 596880 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| || || |||||| ||||||| || ||| ||||| | ||||||| Sbjct 596881 ATTCAGAAGGAGTCTACTCTCCATCTTGTTCTGCGACTTCGTGGAGGAA 596929 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | || || ||||| || || ||||| || || || ||||| Sbjct 595450 GACACAATCGAGAACGTGAAGGCTAAGATCCAGGATAAGGAAGGAATTCCCCCAGATCAG 595509 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||||||||| | || || || || ||||| |||| | | | | ||||| || Sbjct 595510 CAAAGACTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGCACCTTGTCTGACTACAAT 595569 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || || |||||| ||||||| || ||| ||||| | ||||||| Sbjct 595570 ATCCAGAAGGAGTCTACTCTCCATCTTGTTCTGCGACTTCGTGGAGGAA 595618 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||| || ||| | || || ||||| || || ||||| || || || ||||| Sbjct 596259 CGACACTATTGAGAACGTGAAGGCTAAGATCCAGGATAAGGAAGGAATTCCCCCAGATCA 596318 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||||||||||| | || ||| || || | ||||||| | | | | ||||| || Sbjct 596319 ACAAAGACTCATCTTCGCCGGAAAGCAGTTGGAAGATGGACGTACCTTGTCTGACTACAA 596378 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || || || ||||| | || |||||||| | || |||||||||| Sbjct 596379 CATCCAGAAGGAGTCTACCCTGCACCTGGTCCTTCGTCTCAGAGGAGGAA 596428 >seq126 Length=3090016 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || || || ||| | |||||| ||||| | ||| | Sbjct 1375556 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTCG 1375615 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | ||||| |||||| ||||| ||||| || ||||| || || Sbjct 1375616 GACACGATTGAGAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAG 1375675 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || |||||| || |||||||||| | | | || ||||||||| Sbjct 1375676 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGTCGTACTCTCTCTGACTATAAC 1375735 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || ||| || ||||||| ||||| | || ||||||||| Sbjct 1375736 ATCCAGAAGGAAAGCACACTCCATCTCGTCCTTCGTCTGCGAGGAGGAA 1375784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661257193520