Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq109 96.9 9e-15 >seq109 Length=1818587 Score = 96.9 bits (106), Expect = 9e-15 Identities = 203/298 (68%), Gaps = 10/298 (3%) Strand=Plus/Plus Query 363760 TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAG 363819 ||||| || || |||||||||| || || | |||||||||| | |||||||||||| Sbjct 200169 TCGAACGGACTCATTCCCATGCTCCGGGTATACAACAATACTGCTCGTTACGTCGACCAG 200228 Query 363820 GGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATT 363879 || ||| ||||| || || || || || || |||||||| || || ||||| Sbjct 200229 GGAGGAAATAAGCGTCCTGGAGCTTTCGCCATCTACCTCGAGCCGTGGCACGCAGATATC 200288 Query 363880 TTTGAGTTTCTTGAGCTCCG-GAAA-AACACGGG---AAAAGAGGAATTGCGTGCACGTG 363934 ||||| || || ||| | |||| ||||| || ||||||| |||||| |||| Sbjct 200289 TTTGAATT--CTGCTCTCTGAGAAAGAACACTGGTCCCGAAGAGGA---GCGTGCTCGTG 200343 Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA 363994 |||| || || || ||| | |||| | ||| |||||| | || || || || Sbjct 200344 ATCTCTTTCTGGCTCTGTGGATCCCTGATCTTTTCATGAAGAGAGTCGAACAAGATACCG 200403 Query 363995 ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052 | ||||| || | || || | |||||||| ||| | |||| ||||| || || Sbjct 200404 ACTGGTCGCTGATGTGTCCTCGTGAATGTCCCGGTTTGGACGATTGCTGGGGAGAAGA 200461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350410449362