Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq126 96.9 3e-15 seq109 86.0 5e-12 seq81 84.2 2e-11 >seq126 Length=3090016 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || || ||||| || ||||| ||| |||| |||| | Sbjct 1376096 AATGCAAATTTTCGTCAAGACTCTGACGGGTAAGACCATCACCCTCGAGGTGGAGGCTTC 1376155 Query 115345 CGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 |||||| | | || || || ||| || || || || |||||| |||| ||| | Sbjct 1376156 CGACAC-GATCGAGAACGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCGCCTGACC 1376214 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| | ||||| | || ||||| || ||||||||| || | |||| || | Sbjct 1376215 AGCAGCGTCTTATCTTCGCCGGCAAGCAGCTAGAAGATGGTCGTACTCTCTCCGACTACA 1376274 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 |||| || || ||||||||| | ||| |||| || | | || |||||||| Sbjct 1376275 ACATCCAGAAGGAGTCTACTCTTCATTTGGTCCTGCGTCTTCGTGGAGGAAA 1376326 >seq109 Length=1818587 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || || ||||||||||| || || || ||||| ||||| || || | Sbjct 529760 ATGCAGATCTTCGTGAAAACGCTCACTGGGAAGACGATTACTCTCGAAGTCGAAGCCTCC 529819 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | | || ||| || || || || ||||| | || |||||| Sbjct 529820 GACACTATTGAAAACGTCAAAGCTAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAG 529879 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | || || | || ||||| || || ||||||| | ||| || |||| || || Sbjct 529880 CAACGTCTGATCTTCGCAGGCAAGCAGTTGGAAGATGGAAGAACGCTGTCCGACTACAAT 529939 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || ||||| || ||||| | ||| | || || || | || ||||| Sbjct 529940 ATCCAAAAGGAATCTACGCTCCATCTCGTCCTGCGACTTCGCGGAGG 529986 >seq81 Length=934076 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || ||||| || || || ||||| ||||| || | ||| || || Sbjct 596701 ATGCAGATCTTCGTCAAGACCCTTACTGGAAAGACCATCACTCTTGAAGTCGAAGCCTCG 596760 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | || || || || || |||||||| ||||| || ||| Sbjct 596761 GACACAATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGAATCCCCCCAGACCAG 596820 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||||| || | || ||||||||||| || |||| | || || |||| || ||| Sbjct 596821 CAGAGACTCATCTTCGCCGGCAAACAATTGGAGGATGGCCGCACTTTGTCCGACTACAAC 596880 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||| || ||||||||| | ||| | || || || | || ||||||| Sbjct 596881 ATTCAGAAGGAGTCTACTCTCCATCTTGTTCTGCGACTTCGTGGAGGAA 596929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425343009878920