Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq126 116 3e-21 seq81 109 5e-19 seq109 98.7 8e-16 >seq126 Length=3090016 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250 ||| || || ||||| || || | ||||||| |||||| || || || || ||| | Sbjct 1375747 TTCCTTCTGGATGTTATAGTCAGAGAGAGTACGACCATCTTCGAGCTGCTTGCCGGCGAA 1375688 Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310 |||||||||||| |||||||||||||| ||||| ||||| |||||| || | | Sbjct 1375687 GATGAGACGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGGATCTTTGCCTTGACGTT 1375628 Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 |||| ||||| | | |||||| || | ||| | |||||||| |||| ||| || || Sbjct 1375627 CTCAATCGTGTCCGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTCAAAGTCTTGAC 1375568 Query 114371 AAAAATCTGCAT 114382 || |||||||| Sbjct 1375567 GAAGATCTGCAT 1375556 Score = 91.5 bits (100), Expect = 1e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| || || || || ||| ||||||||||||| || ||||| ||||| ||||| || Sbjct 1375437 ATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATTCCTTCCTT 1375378 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| ||||| || | | ||| | ||| |||| | |||||| || | || | Sbjct 1375377 GTCCTGGATCTTGGCCTTGACGTTTTCGATGGTATCGGAAGCTTCGACCTCGAGAGTGAT 1375318 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAA 114389 || || ||||| |||||||| || || || ||||| ||| || Sbjct 1375317 GGTCTTTCCGGTGAGAGTTTTGACGAAGATTTGCATCGCTGAA 1375275 >seq81 Length=934076 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| | || || || | || ||||| || ||||||||||| ||| Sbjct 595121 ATGCCACCACGAAGTCGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCG 595062 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || ||| || | |||||| || ||| ||||||| | ||| ||||| || Sbjct 595061 GACAAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGG 595002 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || |||||||| ||||| || | | || | ||||| | || |||| Sbjct 595001 GGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATTGTGTCCGAGGCTTCG 594942 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || ||||| || || |||||||| Sbjct 594941 ACTTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAGATCTGCAT 594892 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| || ||| | ||| | ||||| || || ||||||||||| ||| Sbjct 596930 ATTCCTCCACGAAGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCG 596871 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| || ||| || | |||||| || ||| ||||||| | ||| ||||| || Sbjct 596870 GACAAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGG 596811 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| ||||| || | | || | ||||| | || |||| Sbjct 596810 GGGATTCCTTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATTGTGTCCGAGGCTTCG 596751 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | || || || || || || || || || ||||||||| Sbjct 596750 ACTTCAAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCATG 596700 >seq109 Length=1818587 Score = 98.7 bits (108), Expect = 8e-16 Identities = 164/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || || || | |||||||| || || |||||||||||| Sbjct 529761 ATGCCACCACGGAGACGAAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCG 529702 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || ||| || || || || || || || | || | |||||| || || ||| Sbjct 529701 CTCAGTGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAAATCAAACGCTGCTGATCGGGA 529642 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| || | | ||| | ||||| | | ||| Sbjct 529641 GGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATAGTGTCAGAAGCCTCG 529582 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAA 114389 || || | ||| | ||||| ||||| |||||||| || || || ||||| ||| || Sbjct 529581 ACTTCGAGGGTGATAGTTTTTCCGGTGAGAGTTTTGACGAAGATTTGCATCGCTGAA 529525 Score = 98.7 bits (108), Expect = 8e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | || || | ||| | || || || ||||| |||||||| ||||| Sbjct 530524 ACCTCCACGAAGACGCAGGACGAGATGGAGAGTCGACTCCTTTTGGATGTTGTAGTCGCT 530465 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || ||| ||| || || || || || || ||||||| | ||| || || ||||| Sbjct 530464 GAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATGAGTCTCTGCTGATCGGGAGG 530405 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||||||||||||| ||||| || | | ||||| |||||| | | |||||| Sbjct 530404 AATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTTTCAATGGTGTCCGAAGCTTCGAC 530345 Query 114335 GTCCACGGT 114343 |||| ||| Sbjct 530344 CTCCAGGGT 530336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133422005892