Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq126 127 2e-24 >seq126 Length=3090016 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | ||||| |||||||| | || |||||| || || ||||| || | Sbjct 1376323 CCTCCACGAAGACGCAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 1376264 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || ||||||||||| || ||||| || || ||||||||||| | || Sbjct 1376263 AGAGTACGACCATCTTCTAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGCGGG 1376204 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || ||||||||| ||| || ||||| || | | ||||||| | ||||| Sbjct 1376203 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCGATCGTGTCGGAAGCCTCCACC 1376144 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||| |||||||| || ||||| || ||||| || || ||||||||| Sbjct 1376143 TCGAGGGTGATGGTCTTACCCGTCAGAGTCTTGACGAAAATTTGCATT 1376096 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||| | ||| | || | ||| | |||||| ||||| || || || || |||| Sbjct 1375782 CCTCCTCGCAGACGAAGGACGAGATGGAGTGTGCTTTCCTTCTGGATGTTATAGTCAGAG 1375723 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| || | || || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 1375722 AGAGTACGACCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGA 1375663 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||||||||| ||| ||| |||| || | | |||||| | ||| || Sbjct 1375662 ATTCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGAAGCTTCGACT 1375603 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| ||||||||||||||||| | ||||| || ||||| ||||| Sbjct 1375602 TCGAGGGTGATGGTTTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 1375556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211503079440