Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq126 113 4e-20 seq109 95.1 1e-14 seq81 84.2 2e-11 >seq126 Length=3090016 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| || ||||| | | |||||||| || |||||||||||| Sbjct 1376323 CCTCCACGAAGACGCAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 1376264 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || || || || |||| |||| |||||||| ||||| || || Sbjct 1376263 AGAGTACGACCATCTTCTAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGCGGG 1376204 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || ||| | | || | ||||||| | ||||||| Sbjct 1376203 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCGATCGTGTCGGAAGCCTCCACC 1376144 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || ||||| |||||||| || || ||||| ||||| Sbjct 1376143 TCGAGGGTGATGGTCTTACCCGTCAGAGTCTTGACGAAAATTTGCAT 1376097 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACT-CCTTTTGAATGTTGTAGTCGCT 138446 || ||||||| ||| | || | ||| | || || | |||| || ||||| ||||| Sbjct 1375782 CCTCCTCGCAGACGAAGGACGAGATGGA-GTGTGCTTTCCTTCTGGATGTTATAGTCAGA 1375724 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| || ||||| || || |||| |||| |||||||| ||||||||||| Sbjct 1375723 GAGAGTACGACCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGG 1375664 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| ||| || | | || | ||||| | | || || Sbjct 1375663 AATTCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGAAGCTTCGAC 1375604 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||| || |||| ||| || || || |||||||| Sbjct 1375603 TTCGAGGGTGATGGTTTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 1375556 >seq109 Length=1818587 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || || || | | | ||||||||||| |||||||||||||| Sbjct 530254 GCCACCACGGAGACGAAGGACCAAGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCGCT 530195 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||||||||| || || |||| | | || |||||||| || || ||||| Sbjct 530194 CAATGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCGGGAGG 530135 Query 138507 TATACCTTCTTTGTC 138521 || ||||| ||||| Sbjct 530134 GATTCCTTCCTTGTC 530120 >seq81 Length=934076 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| ||| | ||| | | |||||||| ||||||||||||||| || ||| || Sbjct 596915 CGCAGAACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCA 596856 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| | |||||| |||| |||| || | ||| ||||| || || || ||||||||| Sbjct 596855 TCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGGGGGATTCCTTCTTTG 596796 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| || || | | || | ||||| | | || || || | || | Sbjct 596795 TCCTGGATCTTGGCCTTCACGTTCTCGATTGTGTCCGAGGCTTCGACTTCAAGAGTGATG 596736 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || || ||||| || || || || || ||||||||| Sbjct 596735 GTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCATG 596700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261215173520