Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq126 185 9e-42 seq109 138 1e-27 seq81 138 1e-27 >seq126 Length=3090016 Score = 185 bits (204), Expect = 9e-42 Identities = 330/490 (67%), Gaps = 39/490 (8%) Strand=Plus/Minus Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 |||| ||||||||| || || || || || ||||| || ||||| || || ||| || Sbjct 2638347 GTCAGGCCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATGGCAGCAAATGAGCCGGAG 2638288 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068 ||||||| |||||||| || ||||| || | || |||||| |||||| || || | | Sbjct 2638287 AAGAAGATTCCCTCGACAGCAGCGAAGGCAATCACTCGCTCGGCGAACGAAGCCTCGTCG 2638228 Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATG 133128 ||| ||||||||||| ||||| |||||||| | |||| ||| || | | |||| Sbjct 2638227 TCGGCAATCCAGCGCAGAGCCCAATCGGCCTTCTTCTTGATGCAGGGAAACTCGAAGATG 2638168 Query 133129 GCGTTCAACAAACGG-------------AGTTT------------------------CTC 133151 ||||| || | |||| |||| ||| Sbjct 2638167 GCGTTGAAGAGACGGTTCCTGAATGATGAGTTGAGGTAAGATAAGGCGAAATCAAACCTC 2638108 Query 133152 TTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTC 133209 | |||| ||| | ||||| ||||| || | ||||| ||||| || | |||| Sbjct 2638107 TCGACAGGATCGCGGATATAGGTTTCGATTAGCTTGCTGTACATCTCCGAATGAATGTTC 2638048 Query 133210 TCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCG 133269 || ||||||||||| |||||||| ||| | || |||||| | ||| ||||||| | | Sbjct 2638047 TCGATGGCGATTTGGAAGCCGTAGAAGAAACGAGCCTCGGATATCTGGACTTCTTTGGAG 2637988 Query 133270 AAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACG 133329 || |||||||| || || ||||||||||| || || ||||||||| ||||||| || Sbjct 2637987 AATCGCTCGACAAGGTTCTCGTTGACGATTCCATCAGAGGCGGCGAAGAAGGCCAAAACA 2637928 Query 133330 TGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGAC 133389 | |||||| | ||||| |||| ||| | ||||||||| | |||| ||| Sbjct 2637927 CGAGAGATGAAGAATCTCTCGTCGTCGGTCATGGCCTCCCAGTCCTTCATGTCTTTGCCG 2637868 Query 133390 AGGTCCACCT 133399 || ||||||| Sbjct 2637867 AGATCCACCT 2637858 Score = 141 bits (156), Expect = 9e-29 Identities = 166/219 (76%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| || || || ||||| || ||||||||| |||| || ||||| | Sbjct 1376096 AATGCAAATTTTCGTCAAGACTCTGACGGGTAAGACCATCACCCTCGAGGTGGAGGCTTC 1376155 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 ||||| | | |||| | |||| || |||| ||||| || || || |||||| ||| Sbjct 1376156 CGACACGATCGAGAACG-TCAAAGCCAAGATCCAGGACAAGGAAGGCAT-CCCGCCTGAC 1376213 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| ||||| || || | || || ||| ||||||| Sbjct 1376214 CAGCAGCGTCTTATCTTCGCCGGCAAGCAGCTAGAAGATGGTCGTACTCTCTCCGACTAC 1376273 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||||| | || || |||||||| |||||| Sbjct 1376274 AACATCCAGAAGGAGTCTACTCTTCATTTGGTCCTGCGT 1376312 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||||||||||||| |||| ||||| || | Sbjct 1375556 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTCG 1375615 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||| |||| ||||| || |||||||| | ||||| Sbjct 1375616 GACACGATTGAGAACG-TCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCA 1375674 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || || | || || ||| ||||| || Sbjct 1375675 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGTCGTACTCTCTCTGACTATAA 1375734 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| |||||| || || ||| | || || ||| || |||| || Sbjct 1375735 CATCCAGAAGGAAAGCACACTCCATCTCGTCCTTCGTCTGCGAGGAGG 1375782 >seq109 Length=1818587 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| ||||| || ||||| |||||| |||| |||||||| | Sbjct 529532 ATGCAAATCTTCGTCAAAACTCTCACCGGAAAAACTATCACCCTCGAAGTCGAGGCTTCT 529591 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | || |||| ||||| || ||||| || |||| || Sbjct 529592 GACACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAG 529651 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| || ||||| ||||| || |||| ||||| || | ||| |||||| Sbjct 529652 CAGCGTTTGATTTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACACTGAGCGATTACAAC 529711 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || || ||||| || ||| Sbjct 529712 ATCCAGAAGGAATCTACTCTCCACTTGGTCCTTCGT 529747 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||||||||| || || || || || |||| ||||| ||| || Sbjct 529760 ATGCAGATCTTCGTGAAAACGCTCACTGGGAAGACGATTACTCTCGAAGTCGAAGCCTCC 529819 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || ||||| | |||| || |||| ||||| || |||||||| |||| || Sbjct 529820 GACACTATTGAAAACG-TCAAAGCTAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCA 529878 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | ||| ||||| ||| |||| || | | || || ||||||||| Sbjct 529879 GCAACGTCTGATCTTCGCAGGCAAGCAGTTGGAAGATGGAAGAACGCTGTCCGACTACAA 529938 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||||| | ||||| ||| | || ||||| Sbjct 529939 TATCCAAAAGGAATCTACGCTCCATCTCGTCCTGCG 529974 Score = 122 bits (134), Expect = 9e-23 Identities = 139/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 38277 ACCATCACCGTCGACGTCGAGGCCACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCT 38335 || |||||| | || ||||| || | |||| | | | ||||| | || | || |||| Sbjct 530330 ACTATCACCCTGGAGGTCGAAGCTTCGGACACCATTGAAAACG-TCAAGGCCAAGATCCA 530388 Query 38336 CGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 |||||||| || ||||| |||| || ||| | ||||| | || ||||| |||||||| Sbjct 530389 GGACAAAGAAGGCATTCCTCCCGATCAGCAGAGACTCATCTTTGCCGGCAAGCAGCTGGA 530448 Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 || | |||||||||| ||||||||||||||||||||| |||| || ||| | || || Sbjct 530449 GGATGGTCGCACCCTCAGCGACTACAACATCCAAAAGGAGTCGACTCTCCATCTCGTCCT 530508 Query 38456 GCGT 38459 |||| Sbjct 530509 GCGT 530512 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| || ||||| || |||| || ||||| || |||| || ||||| Sbjct 530111 AAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAGCAGCGTCTGATTTTTGCCGGCAAG 530170 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||||| || |||| ||||| | | ||||||||||||||||||||| | || || || Sbjct 530171 CAGCTCGAGGACGGTCGCACATTGAGCGACTACAACATCCAAAAGGAGTCTACCCTCCAC 530230 Query 38448 TTGGTGCTGCGT 38459 ||||| || ||| Sbjct 530231 TTGGTCCTTCGT 530242 >seq81 Length=934076 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| ||||| ||||| ||||| ||||||||| | || ||||| ||| | Sbjct 594891 AATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTTGAAGTCGAAGCCTC 594950 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | || | || |||| |||||||||||||||||| | ||||| Sbjct 594951 GGACACAATCGAGAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGACCA 595010 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | ||||| | ||| |||||||| |||| || | ||||| | ||||||||| Sbjct 595011 GCAGAGACTCATCTTCGCCGGCAAACAATTGGAGGATGGCCGCACTTTGTCCGACTACAA 595070 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| || |||||| | || || || ||||| || || Sbjct 595071 CATTCAGAAGGAATCCACCCTTCACTTGGTCCTCCG 595106 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || |||||||| | || ||||| ||| | Sbjct 596701 ATGCAGATCTTCGTCAAGACCCTTACTGGAAAGACCATCACTCTTGAAGTCGAAGCCTCG 596760 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| |||||||| ||||| ||| | ||||| Sbjct 596761 GACACAATCGAGAACG-TGAAGGCCAAGATCCAGGACAAAGAAGGAATCCCCCCAGACCA 596819 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | ||||| | ||| |||||||| |||| || | ||||| | ||||||||| Sbjct 596820 GCAGAGACTCATCTTCGCCGGCAAACAATTGGAGGATGGCCGCACTTTGTCCGACTACAA 596879 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| || ||||| | || || ||| | || ||||| Sbjct 596880 CATTCAGAAGGAGTCTACTCTCCATCTTGTTCTGCG 596915 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | ||||| || |||||||| | || |||||||| | Sbjct 595120 ATGCAGATCTTCGTCAAGACTTTGACGGGAAAGACCATCACACTTGAAGTCGAGGCTTCT 595179 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | |||| ||| |||| ||||| |||||||||||| | ||||| Sbjct 595180 GATACCATCGAGAACG-TCAAAGCAAAGATCCAGGACAAGGAGGGAATTCCCCCAGACCA 595238 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || | | || | ||| || || ||||| || || | || |||||| |||||||| Sbjct 595239 GCAAAGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGACGTACCCTCTCTGACTACAA 595298 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || || || || || || Sbjct 595299 TATCCAGAAGGAGTCCACCCTTCACTTAGTCCTCCG 595334 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 38277 ACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCT 38335 |||||||| |||| || ||||| |||||| | | |||| | || | || |||| Sbjct 596233 ACCATCACACTCGAGGTTGAGGCTTCCGACACTATTGAGAACG-TGAAGGCTAAGATCCA 596291 Query 38336 CGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 || || || ||||||||| | || ||||| | ||||| | ||| || || ||| |||| Sbjct 596292 GGATAAGGAAGGAATTCCCCCAGATCAACAAAGACTCATCTTCGCCGGAAAGCAGTTGGA 596351 Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 || | || ||| | |||||||||||||| ||||| | || ||||| |||| || Sbjct 596352 AGATGGACGTACCTTGTCTGACTACAACATCCAGAAGGAGTCTACCCTGCACCTGGTCCT 596411 Query 38456 GCGTTTGAGAGGCGG 38470 ||| | ||||| || Sbjct 596412 TCGTCTCAGAGGAGG 596426 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| ||||| ||||| ||||| ||||||||| | || ||||| || | Sbjct 596427 AATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTTGAAGTCGAAGCTTC 596486 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | || | || |||| |||||||||||||||||| | ||||| Sbjct 596487 GGACACAATCGAGAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGACCA 596546 Query 38363 ACAGCGGCTCATTTACGCGGG 38383 ||| | ||||| | ||| || Sbjct 596547 GCAGAGACTCATCTTCGCTGG 596567 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || || || || || ||| ||| | || || ||||| | Sbjct 596928 AATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACCCTCATCCCGGATGTTGAGGCTTC 596987 Query 38303 CGACAGCGTGCA--AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| ||| || ||| || || | || ||| |||||| ||||||||||| || Sbjct 596988 TGACACCGT-CATGAAC-CTGAAGGCCAAGATCTTCGACATGGAGGGAATTCCTTTTGAT 597045 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||||| || || | || || || ||| |||| || || || ||||| || ||| Sbjct 597046 GAACAGCGTCTGATCTTTGCCGGAAAGCAGTTGGAAGATGATCGTACCCTGTCTGAGTAC 597105 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| ||||| | || || || |||| || ||| Sbjct 597106 AACATCCAGAAGGAGTCTACCCTTCACGTGGTCCTTCGT 597144 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 38277 ACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTC 38336 |||||||| | || ||||| ||| | |||| | | | | || | || |||| Sbjct 595963 ACCATCACTCTTGAAGTCGAAGCCTCGGACACAATCGAGAATGTCAAGGCCAAGATCCAG 596022 Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 |||||||||||||| ||| | ||||| ||| | ||||| | ||| || || ||||| || Sbjct 596023 GACAAAGAGGGAATCCCCCCAGACCAGCAGAGACTCATCTTCGCTGGAAAGCAGCTCGAG 596082 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | |||||| | |||||||| ||||| ||||| | || || ||| | || ||| Sbjct 596083 GATGGCCGCACCTTGTCTGACTACAATATCCAGAAGGAGTCTACTCTCCATCTTGTTCTG 596142 Query 38457 CG 38458 || Sbjct 596143 CG 596144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171605837440