Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq109 125 6e-24 seq81 100 2e-16 >seq109 Length=1818587 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || || |||||||| || || || ||||||||| | || | | || || Sbjct 529740 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGCTCAGTGTGCGACCGTCCTCG 529681 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| ||||||||||| |||||||| || || ||||| || ||||| Sbjct 529680 AGCTGCTTGCCGGCAAAAATCAAACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCTTGG 529621 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| |||| | ||||||||| | || ||||| || |||| ||||| Sbjct 529620 ATCTTGGCCTTGACATTTTCGATAGTGTCAGAAGCCTCGACTTCGAGGGTGATAGTTTTT 529561 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | |||||| || || || ||||| Sbjct 529560 CCGGTGAGAGTTTTGACGAAGATTTGCAT 529532 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | || | ||| || || || || ||||| || ||||| ||| | Sbjct 530523 CCTCCACGAAGACGCAGGACGAGATGGAGAGTCGACTCCTTTTGGATGTTGTAGTCGCTG 530464 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| ||||| || ||||| || | | ||| |||||||| ||| Sbjct 530463 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATGAGTCTCTGCTGATCGGGAGGA 530404 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||||||||| || || || || || || |||| | ||||| || | ||| || Sbjct 530403 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTTTCAATGGTGTCCGAAGCTTCGACC 530344 Query 101423 TCAAGAGTGA 101432 || || |||| Sbjct 530343 TCCAGGGTGA 530334 >seq81 Length=934076 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| | | || | ||| | ||| || ||||| || || || || ||||| |||| Sbjct 596929 TTCCTCCACGAAGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGG 596870 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | |||| |||||||| || || || || || | | ||| || || || | Sbjct 596869 ACAAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGGG 596810 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || |||||||| || || || || || || | || | ||||| || | ||| | Sbjct 596809 GGATTCCTTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATTGTGTCCGAGGCTTCGA 596750 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||||||| || || || || | || || || || ||||||||| Sbjct 596749 CTTCAAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCATG 596700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277477538187