Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq109 114 2e-20 seq81 96.9 6e-15 >seq109 Length=1818587 Score = 114 bits (126), Expect = 2e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || ||||||||||| || | ||| ||||| ||||| |||||||| || ||||| || Sbjct 529677 TGCTTGCCGGCAAAAATCAAACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCTTGGATC 529618 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | |||| ||||| || |||| ||| ||||| || || |||||||| || Sbjct 529617 TTGGCCTTGACATTTTCGATAGTGTCAGAAGCCTCGACTTCGAGGGTGATAGTTTTTCCG 529558 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || |||||||| Sbjct 529557 GTGAGAGTTTTGACGAAGATTTGCAT 529532 >seq81 Length=934076 Score = 96.9 bits (106), Expect = 6e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193145 TCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGA 193204 ||| || || ||||| | |||| ||| || ||| || |||||||| || || | Sbjct 596916 TCGCAGAACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCC 596857 Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || |||||||| ||||| || || | |||||| || || || || ||||||||||| Sbjct 596856 ATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGGGGGATTCCTTCTTT 596797 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 || || || |||| || | || || || || || | || ||||| ||||| || Sbjct 596796 GTCCTGGATCTTGGCCTTCACGTTCTCGATTGTGTCCGAGGCTTCGACTTCAAGAGTGAT 596737 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || ||||| Sbjct 596736 GGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCAT 596701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899652252075120