Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq81 95.1 2e-14 >seq81 Length=934076 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || | ||| || | || | ||| | ||||| ||| || || || || || Sbjct 596930 ATTCCTCCACGAAGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCG 596871 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| ||||||||||| || || ||||| | |||||| || || || Sbjct 596870 GACAAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGG 596811 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| || || || || || || || || | || || | ||| Sbjct 596810 GGGATTCCTTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATTGTGTCCGAGGCTTCG 596751 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| ||||| ||||| || ||||| | || || | || |||||||| Sbjct 596750 ACTTCAAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCAT 596701 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || || || || || || || |||| ||||||||||| || || ||||| | |||| Sbjct 595073 ATGTTGTAGTCGGACAAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTC 595014 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || || || ||||| ||||| || || || || || ||||| || | Sbjct 595013 TGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATTGTG 594954 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || | ||| ||||| || || ||||| || ||||| | ||||| | || |||||| Sbjct 594953 TCCGAGGCTTCGACTTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAGATCTGC 594894 Query 192535 ATT 192537 ||| Sbjct 594893 ATT 594891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984477590792850