Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq81 109 1e-18 >seq81 Length=934076 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || || | |||||| | || | ||| | ||||| ||| || ||| || || || Sbjct 596930 ATTCCTCCACGAAGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCG 596871 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || ||||||||||| || || || || | |||||| ||||| || Sbjct 596870 GACAAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGG 596811 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| || || || || || || || || || || || | ||| Sbjct 596810 GGGATTCCTTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATTGTGTCCGAGGCTTCG 596751 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| ||||| || ||||| | || || | ||| |||||||| Sbjct 596750 ACTTCAAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCAT 596701 Score = 102 bits (112), Expect = 1e-16 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | |||||| | || || || | || | || || ||| || || || Sbjct 595121 ATGCCACCACGAAGTCGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCG 595062 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || ||||||||||| || || || || | |||||| ||||| || Sbjct 595061 GACAAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGG 595002 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| ||||| || || || || || ||||| || || || || | ||| Sbjct 595001 GGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATTGTGTCCGAGGCTTCG 594942 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| || || ||||| || ||||| | ||||| | ||| ||||||||| Sbjct 594941 ACTTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACGAAGATCTGCATT 594891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905133838987800