Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq99 104 7e-17 seq147 98.7 3e-15 seq124 91.5 4e-13 >seq99 Length=2334346 Score = 104 bits (114), Expect = 7e-17 Identities = 112/146 (77%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 |||| ||||||||| ||||| ||||||||||||||||| ||||| || ||||||| | Sbjct 1103297 CGATGGTCATACGAGAGGGAACGGCATGGGGATTGATGATAATGTCTGGCGTCAGTCCCT 1103238 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTGTCCG 251961 || ||||| ||||| |||| | | | || ||| |||| ||||| || || |||||| Sbjct 1103237 CACAGGTGAAAGGCATGTCCTCCTGC-CGGTACATGATTCCCATAGTACCTTTCTGTCCG 1103179 Query 251962 TGACGAGAACTGAACTTATCACCAAT 251987 || || || |||||| || ||||| Sbjct 1103178 TGTCGCGAGGCGAACTTGTCGCCAAT 1103153 >seq147 Length=324087 Score = 98.7 bits (108), Expect = 3e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 106919 GAACTCATACCATAGAAAAACTTGAACTTTTTACCATCTTCCTCAATTAACTTACCTGGA 106978 || ||||| || ||||||| ||||||||| || || || | ||| || | || || Sbjct 31693 GAGCTCATTCCGTAGAAAAGCTTGAACTTCTTTCCCTCCTTCTCGATAACCTCTCCGCCG 31752 Query 106979 TTTTCATCGTGTCCCGCAAAGACACCGCCAACCATTACGAAATCAGCCCCGCCACCGAAT 107038 ||| ||||||||||||||||| ||| || ||||| || || ||||| || | ||||| Sbjct 31753 CTTTGATCGTGTCCCGCAAAGAGACCACCGACCATGACAAAGTCAGCTCCAGCTCCGAAG 31812 Query 107039 GCTTTAGCCATATCACCAGGGCAAGTAATTCCACCATCACTAAT 107082 || || |||| |||||| || ||| || |||||||| || Sbjct 31813 GCCTTGGCCACATCACCCGGATTGGTACAGCCTCCATCACTCAT 31856 >seq124 Length=1526711 Score = 91.5 bits (100), Expect = 4e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || || |||||||||||||||||||| | | || || || | | || || || Sbjct 1243107 CCGACGGCATCAATTTCGTCAATGAAGAGAATGCAGGGGCTGTTCTTGCGGGCCATGGCG 1243048 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | || | ||||||| | ||| | || ||| ||||||| | ||||| || || Sbjct 1243047 AACATGTCACGCACACGGGCCGGTCCGACTCCCACAAACATTTCGAGGAATTCGGAGCCG 1242988 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 || || ||||||| ||||| |||||||| ||| ||| |||| || || |||||| Sbjct 1242987 GAGACGGTGATGAATGGCACATTGGCTTCGCCGGCTGTCGCCTTCGCGAGCAGCGTCTTA 1242928 Query 289210 CCTGTTCCAGGTGGTCCC 289227 ||||| || || |||||| Sbjct 1242927 CCTGTACCCGGGGGTCCC 1242910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813998186367