Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq102 140 4e-27 seq171 116 5e-20 seq76 113 6e-19 seq137 104 3e-16 seq98 89.7 6e-12 seq126 87.8 2e-11 >seq102 Length=1079475 Score = 140 bits (154), Expect = 4e-27 Identities = 165/221 (75%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| ||| ||||| || |||||||||| ||||| | || Sbjct 708472 GCTTGGCCAGCTCTCCGGGCAGGATGAGGCGGACAGCGGTCTGGACTTCGCGAGAAGAGA 708413 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| |||| || ||||||| |||||||| | ||||||| |||| | Sbjct 708412 TGGTGCTCTTCTTGTTGTAGTGGGCAAGACGGCTGGCCTCGGCGGCGATGCGCTCGAAGA 708353 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||||| |||||||||| ||| | ||| ||||| || |||||||| Sbjct 708352 CGTCGTTGACAAAGGAGTTCATGATGCTCATGGCCTTCGAGGAGACTCCAGTGTCGGGGT 708293 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGAC-GAGTACGA 1254562 | |||||||| || || ||||||| | ||| ||||| || Sbjct 708292 GGACCTGCTTCAGGACACGGTAGATGTA-GACAGAGTAGGA 708253 >seq171 Length=152934 Score = 116 bits (128), Expect = 5e-20 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| ||| || || ||||||||||| | ||||| | || || Sbjct 37560 GCTTGGCCAGTTCTCCGGGCAGGATGAGACGGACGGCGGTCTGTACTTCGCGAGAGCTGA 37619 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| |||| || ||||| | |||||||| |||| || || | | Sbjct 37620 TGGTACTCTTCTTGTTGTAGTGGGCGAGACGACTGGCCTCGGCAGCGATTCGCTCAAAGA 37679 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| ||||||||||||| ||||||| |||| | || || |||||||| Sbjct 37680 CGTCATTGACGAACGAGTTCATGATGGACATCGCCTTGGAGCTGACTCCAGTGTCGGGGT 37739 Query 1254523 GCACCTG 1254529 | ||||| Sbjct 37740 GGACCTG 37746 >seq76 Length=529262 Score = 113 bits (124), Expect = 6e-19 Identities = 139/187 (74%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 1574002 GCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGAC---C 1574058 |||| | |||||||| ||||| | |||||| || ||| || ||| || | | | Sbjct 141655 GCGGAATTGACGTCGTCCGCAACAAAATCAAGAACTTCGC-TC--AGACGAAAGTCACGC 141599 Query 1574059 TGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGG 1574118 ||||||| ||| |||||| | |||||||||||||||||||||| | ||| | || Sbjct 141598 TGCCGCCAGGAAAACACAAGATTATCATCCTCGACGAGGCCGACTCGATGACGGAAGGGG 141539 Query 1574119 CCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGG 1574178 | ||||||||| |||| ||| |||||| ||| ||| ||||| ||||||||||||| Sbjct 141538 CACAGCAGGCCATGCGTCGCACAATGGAAGTTTACAGCAAGACGACTCGCTTTGCCCTGG 141479 Query 1574179 CGTGCAA 1574185 | ||||| Sbjct 141478 CCTGCAA 141472 >seq137 Length=1245648 Score = 104 bits (114), Expect = 3e-16 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 |||||||||| ||||| || | ||||||| ||||| | ||||| || | Sbjct 1012098 AGAAGCGCACTGACGATATTCCTTCGTGGGATGTCGAGTTCCTGAAGGTCGACCAAGGAA 1012157 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | || || ||| | ||| | |||||||||||| | ||||||||| || || ||| | Sbjct 1012158 CACTGTTCGAGCTTATCTTGGCCGCCAACTACTTAGACATCAAGGGCCTCCTTGATGTCA 1012217 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 || ||| | |||||||||||||||||||| ||| | || ||||||||||| || | Sbjct 1012218 CATGTAAGACGGTGGCCAACATGATCAAGGGTAAGACTCCTGAGGAGATCCGACGCACGT 1012277 Query 1592286 TTAACATCAA 1592295 | |||||||| Sbjct 1012278 TCAACATCAA 1012287 >seq98 Length=2199593 Score = 89.7 bits (98), Expect = 6e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 509108 ATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTACATC 509167 || || || |||||||| || | || || |||||||||||||||||||| || |||||| Sbjct 1476945 ATGGGAGGTCGCGAGGGTCTTATTGATACTGCCGTCAAGACGGCCGAGACCGGATACATC 1476886 Query 509168 CAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAGATCAAGCGCGGCGGCCTCGTGCGC 509227 ||||| || |||||| | ||||| || || | |||| || |||| ||| ||| Sbjct 1476885 CAGCGTCGTCTGATCAAGGCCATGGAAAGTGTGATGGTCAACTACGACGGCACCGTACGC 1476826 Query 509228 AACGCCAACGGCGACATCGTCCAGTTTGCCTATGGCGGCGACGG 509271 || ||| ||| | || || ||| | ||| |||| ||||| Sbjct 1476825 AATTCCATCGGTCAAATGGTTCAGCTCCGCTACGGCGAGGACGG 1476782 >seq126 Length=3090016 Score = 87.8 bits (96), Expect = 2e-11 Identities = 118/160 (74%), Gaps = 11/160 (7%) Strand=Plus/Minus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAA 869274 ||||||||||| || || |||||||| ||||| |||||||| ||| || ||| ||||| Sbjct 2638344 AGGCCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATGGCAGCA-AATGAGCCGGAGAA 2638286 Query 869275 AAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTC 869334 ||||| |||||||| || || ||| | || | |||||||| || ||| | |||| Sbjct 2638285 GAAGATTCCCTCGACAGCAGCGAAGGCAATCACTCGCTCGGCGAA-----CGAAG-CCTC 2638232 Query 869335 CTTGTTG---ATCCACTTCATCGCCCAGTCGGCCTTTTTC 869371 | || | ||||| || ||||| |||||||| ||| Sbjct 2638231 GTCGTCGGCAATCCAGCGCAGAGCCCAATCGGCCTTCTTC 2638192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107123525645547