Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq95 118 9e-22 seq161 100 2e-16 seq109 84.2 2e-11 >seq95 Length=527482 Score = 118 bits (130), Expect = 9e-22 Identities = 117/149 (79%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATG 34548 ||||| || || |||| | |||||| ||||| | |||||| |||| ||| ||||||||| Sbjct 498087 ATGGCAGGTCGCTCAAGGGACTTGGCAATTTCCGTCATGTTCACGACGACCGTCTTGATG 498146 Query 34549 CCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGC-GCGGCATTTTGTAGCGGTAGAACGC 34607 || || || || ||||| |||||||| ||| || |||||| |||||||||||||| | Sbjct 498147 CCATTTCCTTTGCCTTCAACCTTGGC-CAGCAGCTTCGGCATCTTGTAGCGGTAGAAGGG 498205 Query 34608 GTCCGCCACATTGCGGTTAACGTTCACAG 34636 ||| | | ||||| |||||||||| || Sbjct 498206 GTCGGTGATGTTGCGATTAACGTTCAGAG 498234 >seq161 Length=883845 Score = 100 bits (110), Expect = 2e-16 Identities = 99/126 (79%), Gaps = 4/126 (3%) Strand=Plus/Minus Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATG 34548 ||||| |||||| | |||| |||||| || || | ||| ||| |||||| || || ||| Sbjct 96590 ATGGCGGGACGTTCCAGCGACTTGGCAATCTCAGTCATATTGGTGATGACCGTTTTTATG 96531 Query 34549 CCGTTGCCCTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACG 34606 || |||||||||||||| |||||||| ||| | |||||||||||||||||||| | Sbjct 96530 CCATTGCCCTTTCCTTCAACCTTGGCAAGCAACT--TGGGCATTTTGTAGCGGTAGAAGG 96473 Query 34607 CGTCCG 34612 |||| Sbjct 96472 GATCCG 96467 >seq109 Length=1818587 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || ||||||||| | ||||| ||||| || ||| ||||| ||| || Sbjct 529532 ATGCAAATCTTCGTCAAAACTCTCACCGGAAAAACTATCACCCTCGAAGTCGAGGCTTCT 529591 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | || || ||||| ||||| ||||| | || ||||| Sbjct 529592 GACACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGATCAG 529651 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | | |||| ||| || || ||||| ||||| | | ||| || ||||||||| Sbjct 529652 CAGCGTTTGATTTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACACTGAGCGATTACAAC 529711 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 || || || |||||||| | ||| |||| Sbjct 529712 ATCCAGAAGGAATCTACTCTCCACTTGGT 529740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840638982163