Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq81 159 2e-34 seq126 125 5e-24 seq109 95.1 8e-15 >seq81 Length=934076 Score = 159 bits (176), Expect = 2e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| | ||||| |||| ||||||||| || || ||||| || ||| | || |||| Sbjct 595331 AGGACTAAGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGTCCATCC 595272 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||||||||||| || |||||||||| | || | ||||||||||| Sbjct 595271 TCGAGCTGCTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGGGGAATTCCCTCCTTGTCC 595212 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| ||||||| | || | ||| |||||||| |||| || |||||| Sbjct 595211 TGGATCTTTGCTTTGACGTTCTCGATGGTATCAGAAGCCTCGACTTCAAGTGTGATGGTC 595152 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||||| | ||||| || |||||||||||| Sbjct 595151 TTTCCCGTCAAAGTCTTGACGAAGATCTGCATG 595119 Score = 138 bits (152), Expect = 7e-28 Identities = 160/214 (75%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| |||| |||||||||||||| ||||| || | |||| |||| Sbjct 595103 AGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCC 595044 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||| || ||||||||||| |||| ||||||||| | || | ||||| ||||| Sbjct 595043 TCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCC 594984 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || ||||| || || || | || ||| ||||| |||| ||| |||| Sbjct 594983 TGGATCTTGGCCTTGAC--ATTCTCGATTGTGTCCGAGGCTTCGACTTCAAGGGTGATGG 594926 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || |||||||| || || ||||||||||| Sbjct 594925 TCTTGCCAGTGAGGGTTTTCACGAAGATCTGCAT 594892 Score = 118 bits (130), Expect = 7e-22 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || | |||| |||| |||| ||| || |||||||| Sbjct 596892 CTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAA 596833 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| |||| ||||||||| | || | || || ||||| | || || || ||| Sbjct 596832 GATGAGTCTCTGCTGGTCTGGGGGGATTCCTTCTTTGTCCTGGATCTTGGCCTTCACGTT 596773 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || ||| ||||| |||| || ||||||||||| || |||||||| || Sbjct 596772 CTCGATTGTGTCCGAGGCTTCGACTTCAAGAGTGATGGTCTTTCCAGTAAGGGTCTTGAC 596713 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 596712 GAAGATCTGCATG 596700 Score = 102 bits (112), Expect = 5e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| | ||||| |||| ||||||||| || || ||||| || ||| | || |||| Sbjct 595871 AGGACTAAGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGTCCATCC 595812 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||||||||||||||||| || |||||||||| | || | |||||||| || Sbjct 595811 TCGAGCTGCTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGGGGAATTCCCTCCTTATC 595753 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| ||||||||| ||||| || || || ||| | || ||||| Sbjct 597140 AGGACCACGTGAAGGGTAGACTCCTTCTGGATGTTGTACTCAGACAGGGTACGATCATCT 597081 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||| |||||||| || || | || || | |||||| ||||| Sbjct 597080 TCCAACTGCTTTCCGGCAAAGATCAGACGCTGTTCATCAAAAGGAATTCCCTCCATGTCG 597021 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT-TCATTGGCCTCGACATCAACGGTTATGGT 34944 || || || | || | | || | ||| ||||| ||||| | | | ||| Sbjct 597020 AAGATCTTGGCCTTCA-GGTTCATGACGGTGTCAGAAGCCTCAACATCCGGGATGAGGGT 596962 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || |||||||| || ||||||||||| Sbjct 596961 CTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 596929 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| || | | ||||||||||| | ||| ||||||||| ||||| ||||| | Sbjct 596428 TTCCTCCTCTGAGACGAAGGACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAG 596369 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | | | | || |||| |||| ||||||||||||||||| |||| ||| || ||| | | Sbjct 596368 ACAAGGTACGTCCATCTTCCAACTGCTTTCCGGCGAAGATGAGTCTTTGTTGATCTGGGG 596309 Query 34869 GCACCCCCTCCTTGTC 34884 | | || ||||| || Sbjct 596308 GAATTCCTTCCTTATC 596293 Score = 86.0 bits (94), Expect = 4e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 34838 CCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGT 34897 || |||||||| |||| ||||| ||| | || | ||||||||||| | || ||| | Sbjct 594759 CCAGCGAAGATAAGTCTCTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGGATCTTTGCT 594700 Query 34898 TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957 |||||| | || | ||| |||||||| |||| ||| |||||||| || || ||| Sbjct 594699 TTGACGTTCTCGATGGTATCAGAAGCCTCGACCTCAAGGGTGATGGTCTTACCGGTTAGG 594640 Query 34958 GTCTTTACAAAGATCTGCAT 34977 || || || ||||| ||||| Sbjct 594639 GTTTTGACGAAGATTTGCAT 594620 >seq126 Length=3090016 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| | || | ||||| || || | ||||| |||||||| ||||||||||| | Sbjct 1375784 TTCCTCCTCGCAGACGAAGGACGAGATGGAGTGTGCTTTCCTTCTGGATGTTATAGTCAG 1375725 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | || | || |||| || || ||||| ||||||||||| || || |||||||| | | Sbjct 1375724 AGAGAGTACGACCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAG 1375665 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | || |||||||| | || ||| |||||| | |||| || || |||| Sbjct 1375664 GAATTCCTTCCTTGTCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGAAGCTTCGA 1375605 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| ||||| || ||||| | ||||| || ||||||||||| Sbjct 1375604 CTTCGAGGGTGATGGTTTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 1375556 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||||||| | | | |||||||| |||| || ||||||||| ||||| ||||| Sbjct 1376326 TTTCCTCCACGAAGACGCAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCG 1376267 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || || | || |||| || || ||||| ||||||||||| || || |||||||| || Sbjct 1376266 GAGAGAGTACGACCATCTTCTAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGC 1376207 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || |||||||| | || || ||||||| | |||| || ||||| Sbjct 1376206 GGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCGATCGTGTCGGAAGCCTCC 1376147 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||| |||||||| ||||| || ||||| || || || ||||| Sbjct 1376146 ACCTCGAGGGTGATGGTCTTACCCGTCAGAGTCTTGACGAAAATTTGCAT 1376097 >seq109 Length=1818587 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || || || ||||| || || | | |||| |||| ||||| || |||||| Sbjct 529950 TCCTTTTGGATATTGTAGTCGGACAGCGTTCTTCCATCTTCCAACTGCTTGCCTGCGAAG 529891 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| |||||||| || | || | || |||||||| | || || ||||||| | Sbjct 529890 ATCAGACGTTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGGATCTTAGCTTTGACGTTT 529831 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || ||| ||||| || | || || ||||| || ||||| || || || Sbjct 529830 TCAATAGTGTCGGAGGCTTCGACTTCGAGAGTAATCGTCTTCCCAGTGAGCGTTTTCACG 529771 Query 34967 AAGATCTGCATG 34978 |||||||||||| Sbjct 529770 AAGATCTGCATG 529759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692041848229