Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq109 145 7e-30 seq126 141 9e-29 seq81 93.3 4e-14 seq76 84.2 2e-11 >seq109 Length=1818587 Score = 145 bits (160), Expect = 7e-30 Identities = 155/202 (77%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || |||||||||| || ||| ||| |||||||||||||||||| Sbjct 529728 GTAGATTCCTTCTGGATGTTGTAATCGCTCAGTGTGCGACC-GTCCTCGAGCTGCTTGCC 529670 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| | |||||||| ||||||||||| ||||||||||| |||||| ||| Sbjct 529669 GGCAAAAATCAAACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGCCTT 529610 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | ||| || |||| ||||| ||||| ||||| ||||| Sbjct 529609 GACATTTTCGATAGTGTCAGAAGCCTCGACTTCGAGGGTGATAGTTTTTCCGGTGAGAGT 529550 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 ||| ||||| || ||||| ||| Sbjct 529549 TTTGACGAAGATTTGCATCGCT 529528 Score = 104 bits (114), Expect = 2e-17 Identities = 103/131 (79%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| |||| || ||| ||| ||||||||| Sbjct 530232 AAGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTCAATGTGCGACC-GTCCTCGAG 530174 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || |||| || |||||||| ||||||||||| ||||||||||| ||| Sbjct 530173 CTGCTTGCCGGCAAAAATCAGACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCTTGGAT 530114 Query 133574 CTTTTGCTTGA 133584 ||| ||||| Sbjct 530113 CTTGGCCTTGA 530103 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || || || |||||||| ||| || ||| || || | ||||||||| Sbjct 529956 GTAGATTCCTTTTGGATATTGTAGTCGGACAGCGTTCTTCCATCTTCCAACTGCTTGCCT 529897 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || || ||||| |||||||| || ||||||||||| |||||| ||| Sbjct 529896 GCGAAGATCAGACGTTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGGATCTTAGCTTTG 529837 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||||| || || || |||| || | || || || || || ||| Sbjct 529836 ACGTTTTCAATAGTGTCGGAGGCTTCGACTTCGAGAGTAATCGTCTTCCCAGTGAGCGTT 529777 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 529776 TTCACGAAGATCTGCATG 529759 Score = 86.0 bits (94), Expect = 6e-12 Identities = 117/161 (73%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || ||||| |||| | ||| ||| | ||||| ||||||||||| Sbjct 530493 GTCGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCA-TCCTCCAGCTGCTTGCC 530435 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| | |||||| |||||||| |||||||| ||||| |||||| ||| Sbjct 530434 GGCAAAGATGAGTCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGATCTTGGCCTT 530375 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGA 133623 || | |||| ||||| | | || || || | ||||| Sbjct 530374 GACGTTTTCAATGGTGTCCGAAGCTTCGACCTCCAGGGTGA 530334 >seq126 Length=3090016 Score = 141 bits (156), Expect = 9e-29 Identities = 157/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| ||||| || ||||| ||| | || ||| | || || || Sbjct 1376302 AAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCA-TCTTCTAG 1376244 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | || || ||||||||||| || ||||||||||||||||| ||| Sbjct 1376243 CTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGAT 1376184 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| | ||| | |||||||| | |||||| |||| ||||| ||| || || Sbjct 1376183 CTTGGCTTTGACGTTCTCGATCGTGTCGGAAGCCTCCACCTCGAGGGTGATGGTCTTACC 1376124 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||| || |||||||| ||||| Sbjct 1376123 CGTCAGAGTCTTGACGAAAATTTGCAT 1376097 Score = 140 bits (154), Expect = 3e-28 Identities = 124/155 (80%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || |||||||||||||| ||| | ||||| ||||||||||| ||||| || ||||||||| Sbjct 1375710 TCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATTCCTTCCTTG 1375651 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||||| ||||| | ||||| |||||| | | || || |||| ||||| | Sbjct 1375650 TCCTGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGAAGCTTCGACTTCGAGGGTGATG 1375591 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||| |||| ||| || ||||| |||||||| Sbjct 1375590 GTTTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 1375556 Score = 107 bits (118), Expect = 2e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || |||||||||||||| ||| | ||||| |||||||| || || || || ||||||||| Sbjct 1375436 TCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATTCCTTCCTTG 1375377 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | || |||| | || || |||| |||| | Sbjct 1375376 TCCTGGATCTTGGCCTTGACGTTTTCGATGGTATCGGAAGCTTCGACCTCGAGAGTGATG 1375317 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 || || ||||| |||||||| ||||| || ||||| ||| Sbjct 1375316 GTCTTTCCGGTGAGAGTTTTGACGAAGATTTGCATCGCT 1375278 Score = 82.4 bits (90), Expect = 7e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||| ||||| ||| | ||||| || |||||||| || ||||| |||||||| Sbjct 1375981 TCCTCGAGCTGTTTGCCGGCGAAGATGAGACGTTGCTGGTCAGGCGGGATACCTTCCTTA 1375922 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGA 133623 || ||||| ||||| | ||||| |||||| ||| ||| || || | |||| Sbjct 1375921 TCCTGAATCTTGGCCTTGACGTTCTCAATTGTGTCGCTGGCCTCGACTTCTAGAGTGA 1375864 >seq81 Length=934076 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| |||||||| || | || | | | |||||||| Sbjct 595325 AAGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGTCCA-TCCTCGAG 595267 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | || | | |||||||| || || || || |||||||| ||| Sbjct 595266 CTGCTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGAT 595207 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| |||| | ||| | || || | | ||| || || | |||| ||| || || Sbjct 595206 CTTTGCTTTGACGTTCTCGATGGTATCAGAAGCCTCGACTTCAAGTGTGATGGTCTTTCC 595147 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| ||| || ||||| ||||||||| Sbjct 595146 CGTCAAAGTCTTGACGAAGATCTGCATG 595119 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||| || || ||| | | | |||||||||||||| || Sbjct 596126 GTAGACTCCTTCTGGATATTGTAGTCAGACAAGGTGCGGCCA-TCCTCGAGCTGCTTTCC 596068 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| | ||||||||| || ||||| || || ||||| |||||| ||| Sbjct 596067 AGCGAAGATGAGTCTCTGCTGGTCTGGGGGGATTCCCTCTTTGTCCTGGATCTTGGCCTT 596008 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGT 133627 || | ||| | ||||| | || || || || | |||| ||| Sbjct 596007 GACATTCTCGATTGTGTCCGAGGCTTCGACTTCAAGAGTGATGGT 595963 >seq76 Length=529262 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 133536 CGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACC 133595 ||||||||||| || || || || ||||| || |||||| ||| | | ||||| Sbjct 255884 CGCTGCTGGTCAGGGGGAATTCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCAATG 255943 Query 133596 GTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATC 133655 || || | || ||| || |||| ||||| || || ||||||||||| || ||||| ||| Sbjct 255944 GTATCAGAGGCCTCGACCTCGAGGGTGATAGTCTTACCGGTCAGAGTCTTCACGAAGATC 256003 Query 133656 TGCATGGCT 133664 |||||| || Sbjct 256004 TGCATGACT 256012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419645832840