Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq81 145 2e-29 seq109 123 6e-23 seq126 107 5e-18 >seq81 Length=934076 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || ||||| || |||||| | ||||| ||| || ||| Sbjct 596704 CAGATCTTCGTCAAGACCCTTACTGGAAAGACCATCACTCTTGAAGTCGAAGCCTCGGAC 596763 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| ||||| || || ||||||||||| || ||| || Sbjct 596764 ACAATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGAATCCCCCCAGACCAGCAG 596823 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||||||||| || || ||||| ||||| | |||||| |||| |||||| | Sbjct 596824 AGACTCATCTTCGCCGGCAAACAATTGGAGGATGGCCGCACTTTGTCCGACTACAACATT 596883 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||||||||| || |||||| || ||||||| Sbjct 596884 CAGAAGGAGTCTACTCTCCATCTTGTTCTGCGACTTCG 596921 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| ||||| || || || ||||| | ||||| ||| || |||||| |||| Sbjct 594907 AAAACCCTCACTGGCAAGACCATCACCCTTGAAGTCGAAGCCTCGGACACAATCGAGAAT 594966 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || ||||| |||||| || ||| || ||||| |||||| Sbjct 594967 GTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGACCAGCAGAGACTCATCTTC 595026 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| || || ||||| ||||| | |||||| |||| |||||| | ||||| || || Sbjct 595027 GCCGGCAAACAATTGGAGGATGGCCGCACTTTGTCCGACTACAACATTCAGAAGGAATCC 595086 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||| | || | ||||||| Sbjct 595087 ACCCTTCACTTGGTCCTCCGACTTCG 595112 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206203 ACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAA 206262 || |||||| | ||||| ||| || |||||| |||| || ||| ||||| || Sbjct 595963 ACCATCACTCTTGAAGTCGAAGCCTCGGACACAATCGAGAATGTCAAGGCCAAGATCCAG 596022 Query 206263 GAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAA 206322 || ||||| ||||| || ||| || ||||| |||||||| ||||||||| | || Sbjct 596023 GACAAAGAGGGAATCCCCCCAGACCAGCAGAGACTCATCTTCGCTGGAAAGCAGCTCGAG 596082 Query 206323 GATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||||| | || ||| | || ||||| ||||||| ||||||||||| || |||||| || Sbjct 596083 GATGGCCGCACCTTGTCTGACTACAATATCCAGAAGGAGTCTACTCTCCATCTTGTTCTG 596142 Query 206383 AGACTTCG 206390 ||||||| Sbjct 596143 CGACTTCG 596150 Score = 118 bits (130), Expect = 3e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||||||| || || |||||||| ||||||||||||||| Sbjct 596284 AAGATCCAGGATAAGGAAGGAATTCCCCCAGATCAACAAAGACTCATCTTCGCCGGAAAG 596343 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||||||| | || ||| | || |||||| ||||||| |||||||| || ||| Sbjct 596344 CAGTTGGAAGATGGACGTACCTTGTCTGACTACAACATCCAGAAGGAGTCTACCCTGCAC 596403 Query 206374 CTTGT 206378 || || Sbjct 596404 CTGGT 596408 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206203 ACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAA 206262 || |||||| | || || || || |||||| |||| || ||| ||||| || Sbjct 595423 ACTATCACTCTCGAGGTTGAGGCCTCGGACACAATCGAGAACGTGAAGGCTAAGATCCAG 595482 Query 206263 GAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAA 206322 || || ||||||||| || || |||||||| |||||||| ||||||||| | || Sbjct 595483 GATAAGGAAGGAATTCCCCCAGATCAGCAAAGACTCATCTTCGCTGGAAAGCAGCTCGAG 595542 Query 206323 GATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||||| | || ||| | || ||||| ||||||| ||||||||||| || |||||| || Sbjct 595543 GATGGCCGCACCTTGTCTGACTACAATATCCAGAAGGAGTCTACTCTCCATCTTGTTCTG 595602 Query 206383 AGACTTCG 206390 ||||||| Sbjct 595603 CGACTTCG 595610 Score = 104 bits (114), Expect = 6e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || ||||| || ||||| | ||||| || |||||| Sbjct 595123 CAGATCTTCGTCAAGACTTTGACGGGAAAGACCATCACACTTGAAGTCGAGGCTTCTGAT 595182 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || |||||||| ||| || || || || |||||| || ||| || Sbjct 595183 ACCATCGAGAACGTCAAAGCAAA-GATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCA 595241 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| | |||||||||||||||||| | || |||||| | || | | || ||||| | Sbjct 595242 AAGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGACGTACCCTCTCTGACTACAATAT 595301 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||||| || |||||| | || | ||||||| Sbjct 595302 CCAGAAGGAGTCCACCCTTCACTTAGTCCTCCGACTTCG 595340 Score = 104 bits (114), Expect = 6e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| || |||||| || ||||||||||| ||||||| ||| ||||||| ||| || Sbjct 595610 CGAAGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCAGACAAGGTG 595551 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||| || ||||||||||| |||||||| || | ||| ||| Sbjct 595550 CGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGTCTTTGCTGA 595506 Score = 100 bits (110), Expect = 7e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| || |||||| || ||||||||||| ||||||| ||| ||||||| ||| || Sbjct 596150 CGAAGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCAGACAAGGTG 596091 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAG 204846 | ||||| || ||||||||||| |||||||| || Sbjct 596090 CGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAG 596056 Score = 100 bits (110), Expect = 7e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 || ||||| || |||||||| ||||||| || ||||||| ||| || | |||||||||| Sbjct 596408 ACCAGGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTACGTCCATCTTCC 596349 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | |||||||||||||||||| || | ||||||| Sbjct 596348 AACTGCTTTCCGGCGAAGATGAGTCTTTGTTGA 596316 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206203 ACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAA 206262 || |||||| | || || || ||| ||||| | || || ||| ||||| || Sbjct 595693 ACTATCACTCTCGAGGTTGAGGCTTCCGACACTATTGAGAACGTGAAGGCTAAGATCCAG 595752 Query 206263 GAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAA 206322 || || || |||||| || ||| |||||| | |||||||||||||||||| | || Sbjct 595753 GATAAGGAGGGAATTCCCCCAGACCAGCAAAGATTGATCTTCGCCGGAAAGCAGCTCGAG 595812 Query 206323 GATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 |||||| | || | | || ||||| ||||||| ||||| || |||||| | || | Sbjct 595813 GATGGACGTACCCTCTCTGACTACAATATCCAGAAGGAGTCCACCCTTCACTTAGTCCTC 595872 Query 206383 AGACTTCG 206390 ||||||| Sbjct 595873 CGACTTCG 595880 >seq109 Length=1818587 Score = 123 bits (136), Expect = 6e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||||||||| || || ||||| ||| | ||||| ||| || ||||| | ||| Sbjct 529775 AAAACGCTCACTGGGAAGACGATTACTCTCGAAGTCGAAGCCTCCGACACTATTGAAAAC 529834 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||||| || || || ||||||||| || || ||| | || ||||| Sbjct 529835 GTCAAAGC-TAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAGCAACGTCTGATCTT 529893 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||||||||||||||||| || || |||| ||||| |||| || || || Sbjct 529894 CGCAGGCAAGCAGTTGGAAGATGGAAGAACGCTGTCCGACTACAATATCCAAAAGGAATC 529953 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| || || || || || ||||||| Sbjct 529954 TACGCTCCATCTCGTCCTGCGACTTCG 529980 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| || || || || || ||||| || || |||| ||| ||||| | || || Sbjct 529980 CGAAGTCGCAGGACGAGATGGAGCGTAGATTCCTTTTGGATATTGTAGTCGGACAGCGTT 529921 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||||||||| |||||| || |||||||| || ||||| ||| Sbjct 529920 CTTCCATCTTCCAACTGCTTGCCTGCGAAGATCAGACGTTGCTGA 529876 >seq126 Length=3090016 Score = 107 bits (118), Expect = 5e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || || || || ||||| | || ||||| ||| ||||| |||| Sbjct 1376111 CAAGACTCTGACGGGTAAGACCATCACCCTCGAGGTGGAGGCTTCCGACACGATCGAGAA 1376170 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||||| || ||| || || || ||||| || ||| ||| || | ||||||| Sbjct 1376171 CGTCAAAGCCAA-GATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGTCTTATCT 1376229 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 ||||||| |||||| | |||||||| | ||| | |||| |||||| ||||||| |||| Sbjct 1376230 TCGCCGGCAAGCAGCTAGAAGATGGTCGTACTCTCTCCGACTACAACATCCAGAAGGAGT 1376289 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||||| | || || | ||||| Sbjct 1376290 CTACTCTTCATTTGGTCCTGCGTCTTCG 1376317 Score = 87.8 bits (96), Expect = 4e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| ||||| ||||| || |||||| | || || ||| ||| || || ||||| Sbjct 1375296 CAAAACTCTCACCGGAAAGACCATCACTCTCGAGGTCGAAGCTTCCGATACCATCGAAAA 1375355 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || ||||||||| ||||| || | || ||||| Sbjct 1375356 CGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCGGATCAGCAGCGTCTCATCTT 1375415 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACT 206334 |||||| |||||| | |||||||| || ||| Sbjct 1375416 CGCCGGCAAGCAGCTCGAAGATGGCAGAACT 1375446 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || ||||| ||||| | ||||| ||| ||| ||| Sbjct 1375559 CAGATCTTCGTCAAGACTTTGACGGGCAAAACCATCACCCTCGAAGTCGAAGCTTCGGAC 1375618 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||| || || || ||||||||| |||||| || Sbjct 1375619 ACGATTGAGAACGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCTCCGGACCAGCAG 1375678 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | |||||||| | ||| | | || || ||| || Sbjct 1375679 CGTCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGTCGTACTCTCTCTGACTATAACATC 1375738 Query 206353 CAGAAAGA 206360 ||||| || Sbjct 1375739 CAGAAGGA 1375746 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | || || | |||||||||||||| ||||||| || ||||| | | ||| Sbjct 1376317 CGAAGACGCAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTA 1376258 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||||| |||||||| |||||||||||||| || || || Sbjct 1376257 CGACCATCTTCTAGCTGCTTGCCGGCGAAGATAAGACGCTGCTG 1376214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181817907862911