Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq126 111 1e-19 seq109 95.1 1e-14 seq81 82.4 7e-11 >seq126 Length=3090016 Score = 111 bits (122), Expect = 1e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||| ||||| | | || |||||||| | ||| |||||| || |||||||| ||| Sbjct 1376326 TTTCCTCCACGAAGACGCAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCG 1376267 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | | || || | || || |||||||| || || || || | ||||||||||| | Sbjct 1376266 GAGAGAGTACGACCATCTTCTAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGC 1376207 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTC 35685 || | || ||||||||| |||| || |||| ||| | | ||||||| | || Sbjct 1376206 GGGATGCCTTCCTTGTCCTGGATC-TTGGCTTTGACGTTCTCGATCGTGTCGGAAGCCTC 1376148 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||||| | ||||| || |||||||||| ||| || || || || ||||||| Sbjct 1376147 CACCTCGAGGGTGATGGTCTTACCCGTCAGAGTCTTGACGAAAATTTGCATTC 1376095 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || || ||||| || ||||| || || | | || || | || || |||||||| || Sbjct 1375752 GTGCTTTCCTTCTGGATGTTATAGTCAGAGAGAGTACGACCATCTTCGAGCTGCTTGCCG 1375693 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || || | ||||||||||||| ||||| | ||||||||| ||||||| ||| Sbjct 1375692 GCGAAGATGAGACGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGGATCTTTGCCTTG 1375633 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | |||||| | ||| || || | ||||| ||||| ||||||||||| Sbjct 1375632 ACGTTCTCAATCGTGTCCGAAGCTTCGACTTCGAGGGTGATGGTTTTGCCCGTCAAAGTC 1375573 Query 35720 TTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 1375572 TTGACGAAGATCTGCAT 1375556 >seq109 Length=1818587 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| ||||| || |||||||||||| | Sbjct 529758 CCACCACGGAGACGAAGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGCTC 529699 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| || ||||| ||||| |||||||| || | ||| Sbjct 529698 AGTGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAAATCAAACGCTGCTGATCGGGAGGG 529639 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| ||| | | || | | ||||| | || || Sbjct 529638 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATAGTGTCAGAAGCCTCGACT 529579 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| ||||| || || | |||||| || || || ||||| Sbjct 529578 TCGAGGGTGATAGTTTTTCCGGTGAGAGTTTTGACGAAGATTTGCAT 529532 >seq81 Length=934076 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||||||||| |||| ||| || || | || |||| || || || || || Sbjct 595082 TCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCCAATTGTTTGCCGGCGAAG 595023 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | | ||||||||| | |||| | ||| |||||| |||||| ||| | | | Sbjct 595022 ATGAGTCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTC 594963 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| | ||| || || | ||||| || || || || | |||||||| Sbjct 594962 TCGATTGTGTCCGAGGCTTCGACTTCAAGGGTGATGGTCTTGCCAGTGAGGGTTTTCACG 594903 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 594902 AAGATCTGCATTC 594890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792523730280