Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq109 127 2e-24 >seq109 Length=1818587 Score = 127 bits (140), Expect = 2e-24 Identities = 307/462 (66%), Gaps = 6/462 (1%) Strand=Plus/Plus Query 105139 TGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCG 105198 ||| || ||||| || |||| | || || | |||| ||| || ||| | || || Sbjct 200861 TGTGACGAAAAATCTGAACAAGATCATCGACATTAATTATTATCCGGTTCCGGAAGCCCG 200920 Query 105199 TAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATT 105258 ||| || || || | || ||||| || || || || || ||||| || || |||| || Sbjct 200921 TAATTCAAACATACGTCATCGTCCCATCGGACTGGGAGTACAGGGCCTTGCCGATGCTTT 200980 Query 105259 CATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATT 105318 ||| | ||| || || |||| |||||| || | || ||| || || Sbjct 200981 CATGTTGATGCGCTACAACTTCAATTCTCCCGAAGCCCGAGATTTGAACAAGCGAATCTT 201040 Query 105319 TGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCC 105378 ||||| || ||||||| ||||| ||||| || || |||| ||| ||||| Sbjct 201041 CGAGACGATCTATCACGGAGCTCTGGAGGCATCTTGTGAACTGGCCGAGCAACTCGGTCC 201100 Query 105379 ATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGA 105438 || || || | ||||| ||| | || |||| | || ||||| |||||||||| Sbjct 201101 CTACGAGACGTACGAGGGCAGTCCGGTCTCCAAAGGAATCCTGCAATTCGATATGTGGGG 201160 Query 105439 AGGTGAGACCAAGCTT---CACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAA 105495 || | | ||| || | || | ||||||| |||| || |||||| |||| Sbjct 201161 AGTT-ACACC--GCCTGGCCAATGCGACTGGCTCACTCTTCGCGAGAAGATCAAGAAGAA 201217 Query 105496 GGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTT 105555 || | ||||||||||| || |||||||| ||||| || ||||| || || ||||| | Sbjct 201218 TGGAATCCGTAACAGTCTGCTGATGGCTCCTATGCCCACTGCCTCGACTGCTCAAATTCT 201277 Query 105556 GGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 || || || || | | |||| |||||||| ||||||| || Sbjct 201278 TGGAAACAACGAGTCCATTGAGCCCTACACCTCGAACATATA 201319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259407464840