Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq109 105 7e-18 >seq109 Length=1818587 Score = 105 bits (116), Expect = 7e-18 Identities = 183/265 (69%), Gaps = 1/265 (0%) Strand=Plus/Minus Query 79328 CCGGG-CACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATG 79386 ||||| || || | || |||||||| |||||| || | || || ||| |||| Sbjct 200437 CCGGGACATTCACGAGGACACATCAGCGACCAGTCGGTATCTTGTTCGACTCTCTTCATG 200378 Query 79387 AAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCC 79446 || || || ||||||||||| ||| ||||| || || |||| ||| ||| || Sbjct 200377 AAAAGATCAGGGATCCACAGAGCCAGAAAGAGATCACGAGCACGCTCCTCTTCGGGACCA 200318 Query 79447 TGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATG 79506 |||| | ||| | || || | ||| || |||||||||||||| || |||||| Sbjct 200317 GTGTTCTTTCTCAGAGAGCAGAATTCAAAGATATCTGCGTGCCACGGCTCGAGGTAGATG 200258 Query 79507 GCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAA 79566 ||||| | || ||||| || ||||||| |||||| || || || |||||| | Sbjct 200257 GCGAAAGCTCCAGGACGCTTATTTCCTCCCTGGTCGACGTAACGAGCAGTATTGTTGTAT 200198 Query 79567 ACTCGGAGCATGGGCACGATGCCGT 79591 || ||||||||||| | || |||| Sbjct 200197 ACCCGGAGCATGGGAATGAGTCCGT 200173 Score = 91.5 bits (100), Expect = 2e-13 Identities = 179/265 (68%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||| || | || |||||||| || | |||||| || || | |||||| ||||||| | Sbjct 200173 ACGGACTCATTCCCATGCTCCGGGTATACAACAATACTGCTCGTTACGTCGACCAGGGAG 200232 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 | || || || | |||||||||||||||||||| |||||||| || || | | Sbjct 200233 GAAATAAGCGTCCTGGAGCTTTCGCCATCTACCTCGAGCCGTGGCACGCAGATATCTTTG 200292 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | ||| | ||| | |||| ||| ||| ||| ||| ||| || ||||| Sbjct 200293 AATTCTGCTCTCTGAGAAAGAACACTGGTCCCGAAGAGGAGCGTGCTCGTGATCTCTTTC 200352 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 ||| ||||||| || || || |||||| ||| || || | || || ||| | Sbjct 200353 TGGCTCTGTGGATCCCTGATCTTTTCATGAAGAGAGTCGAACAAGATACCGACTGGTCGC 200412 Query 19653 TGATGTGCCCGCACGAATGCCCTGG 19677 ||||||| || | ||||| || || Sbjct 200413 TGATGTGTCCTCGTGAATGTCCCGG 200437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523490397040