Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq109 111 2e-19 seq126 82.4 8e-11 >seq109 Length=1818587 Score = 111 bits (122), Expect = 2e-19 Identities = 246/364 (68%), Gaps = 4/364 (1%) Strand=Plus/Plus Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 ||| || | || |||||||| || | |||||| || || || |||||| ||||||| || Sbjct 200175 GGACTCATTCCCATGCTCCGGGTATACAACAATACTGCTCGTTACGTCGACCAGGGAGGA 200234 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 ||||| || | ||||||||||||||||||||||||||||| || || | || Sbjct 200235 AATAAGCGTCCTGGAGCTTTCGCCATCTACCTCGAGCCGTGGCACGCAGATATCTTTGAA 200294 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTAC 53670 || | ||| | ||| ||| ||||||| ||| ||| ||||| || ||| Sbjct 200295 TTCTGCTCTCTGAGAAAGAACACTGGTCCCGAAGAGGAGCG-TGCTCGTGATCTCTTTCT 200353 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 ||||||||||| || || || |||||| | | || || | || || |||| || Sbjct 200354 GGCTCTGTGGATCCCTGATCTTTTCATGAAGAGAGTCGAACAAGATACCGACTGGTCGCT 200413 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 |||||| || || || ||||| | | | | || || || || || | || | Sbjct 200414 GATGTGTCCTCGTGAATGTCCCGGTTTGGACGATTGCTGGGGAGAAGAATTCGAGAAGCT 200473 Query 53791 GTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTAT 53849 || | ||||| ||| | | || |||| | ||| |||||||||||||| || | | Sbjct 200474 TTACACTAAGTACG-AGTCCGAAGGACGCTTCCGTAAGCAGGTCAAGGCGCGTAAGCTCT 200532 Query 53850 GGGA 53853 |||| Sbjct 200533 GGGA 200536 >seq126 Length=3090016 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843 |||||||| ||||| | ||||| |||||||| ||||||||||||| ||| |||||| Sbjct 2638365 ATCAATTCGTTCGATTGGGTCAGGCCGGGCATAAGACCACGCTTCTTCAGCCAGAAGATG 2638306 Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903 ||| || || || ||||||||| || |||||| || ||||| | | || | Sbjct 2638305 GCAGCAAATGAGCCGGAGAAGAAGATTCCCTCGACAGCAGCGAAGGCAATCACTCGCTCG 2638246 Query 74904 GCGAACGGTGCATCG 74918 ||||||| || ||| Sbjct 2638245 GCGAACGAAGCCTCG 2638231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214693521800