Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq81 131 1e-25 seq109 123 2e-23 >seq81 Length=934076 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || |||||| | || || |||||||| ||| | || Sbjct 594892 ATGCAGATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTTGAAGTCGAAGCCTCG 594951 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| || || || |||||||| || || || || || || Sbjct 594952 GACACAATCGAGAATGTCAAGGCCAAGATCCAGGACAAAGAGGGAATTCCCCCAGACCAG 595011 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||||||||||||| || | || | ||||| |||||| Sbjct 595012 CAGAGACTCATCTTCGCCGGCAAACAATTGGAGGATGGCCGCACTTTGTCCGACTACAAC 595071 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || ||| | || ||||| | || | || |||||||| Sbjct 595072 ATTCAGAAGGAATCCACCCTTCACTTGGTCCTCCGACTTCGTGGTGGCAT 595121 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || || ||| | || ||||||||||| ||| | || Sbjct 596700 CATGCAGATCTTCGTCAAGACCCTTACTGGAAAGACCATCACTCTTGAAGTCGAAGCCTC 596759 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| || || || || || ||||||||||| || || || || || Sbjct 596760 GGACACAATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAAGGAATCCCCCCAGACCA 596819 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||||||||||||||| || | || | ||||| ||||| Sbjct 596820 GCAGAGACTCATCTTCGCCGGCAAACAATTGGAGGATGGCCGCACTTTGTCCGACTACAA 596879 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 |||||| |||||||| || | ||| | ||| |||| Sbjct 596880 CATTCAGAAGGAGTCTACTCTCCATCTTGTTCTGCG 596915 >seq109 Length=1818587 Score = 123 bits (136), Expect = 2e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 || ||||| || || || |||||||| ||||| || |||| || || ||||| || | Sbjct 529529 GCGATGCAAATCTTCGTCAAAACTCTCACCGGAAAAACTATCACCCTCGAAGTCGAGGCT 529588 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 || ||| | || || | ||||| || || |||||||| ||||| || || |||||| Sbjct 529589 TCTGACACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCCGAT 529648 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || |||||||| || | |||||||| || | || ||| || || | ||||||| Sbjct 529649 CAGCAGCGTTTGATTTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACACTGAGCGATTAC 529708 Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || || | || ||||| | ||| | || |||||||| Sbjct 529709 AACATCCAGAAGGAATCTACTCTCCACTTGGTCCTTCGTCTCCGTGGTGGCAT 529761 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 27024 ATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGAC 27083 |||||||| || || ||| | || ||| | || || | ||||| || || |||||| Sbjct 530063 ATTACTCTAGAGGTCGAAGCTTCTGACACTATCGAAAATGTCAAGGCCAAGATCCAAGAC 530122 Query 27084 AAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGAC 27143 || ||||| || || |||||||| |||||| | || | |||||||| || | || ||| Sbjct 530123 AAGGAAGGAATCCCTCCCGATCAGCAGCGTCTGATTTTTGCCGGCAAGCAGCTCGAGGAC 530182 Query 27144 AGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGT 27203 || || | ||| |||||||| ||||||||||| ||| | || ||||| | ||| Sbjct 530183 GGTCGCACATTGAGCGACTACAACATCCAAAAGGAGTCTACCCTCCACTTGGTCCTTCGT 530242 Query 27204 TTGCGGGGTGGCAT 27217 | || |||||||| Sbjct 530243 CTCCGTGGTGGCAT 530256 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 27019 AGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTC 27078 || |||| || || || || ||| | || ||| | ||||| | ||||| || || | Sbjct 530328 AGACTATCACCCTGGAGGTCGAAGCTTCGGACACCATTGAAAACGTCAAGGCCAAGATCC 530387 Query 27079 AAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGG 27138 | |||||||||||||| || |||||||| ||| | | || | |||||||| || ||| Sbjct 530388 AGGACAAAGAAGGCATTCCTCCCGATCAGCAGAGACTCATCTTTGCCGGCAAGCAGCTGG 530447 Query 27139 AAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTT 27198 | || || ||| | ||| |||||||| |||||||||||||| | ||| | || Sbjct 530448 AGGATGGTCGCACCCTCAGCGACTACAACATCCAAAAGGAGTCGACTCTCCATCTCGTCC 530507 Query 27199 TGCGTTTGCGGGGTGG 27214 ||||| | || || || Sbjct 530508 TGCGTCTTCGTGGAGG 530523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917361632320