Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22]
191 sequences; 59,468,623 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq109 168 2e-36
seq126 159 8e-34
seq81 147 5e-30
>seq109
Length=1818587
Score = 168 bits (186), Expect = 2e-36
Identities = 170/221 (77%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
||||||| |||||| || ||||| || ||||| ||||||| |||||| |||| || |||
Sbjct 529980 CGAAGTCGCAGGACGAGATGGAGCGTAGATTCCTTTTGGATATTGTAGTCGGACAGCGTT 529921
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| |||||||| | |||||| || |||||||| || ||||| || ||||| ||||| |||
Sbjct 529920 CTTCCATCTTCCAACTGCTTGCCTGCGAAGATCAGACGTTGCTGATCGGGAGGAATTCCT 529861
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| || || ||| || ||||| |||| ||| || || |
Sbjct 529860 TCCTTGTCCTGGATCTTAGCTTTGACGTTTTCAATAGTGTCGGAGGCTTCGACTTCGAGA 529801
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| || || | ||||| | ||| | |||||
Sbjct 529800 GTAATCGTCTTCCCAGTGAGCGTTTTCACGAAGATCTGCAT 529760
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||||||||| ||||| || |||| ||||||||| || || | || ||
Sbjct 529743 AGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGCTCAGTGTGCGACCGTCC 529684
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || || || | || || || ||||| || || ||||||||||||
Sbjct 529683 TCGAGCTGCTTGCCGGCAAAAATCAAACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCT 529624
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| |||||| ||||| || | || || || | ||||| ||
Sbjct 529623 TGGATCTTGGCCTTGACATTTTCGATAGTGTCAGAAGCCTCGACTTCGAGGGTGATAGTT 529564
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | |||||| | ||| | ||||||
Sbjct 529563 TTTCCGGTGAGAGTTTTGACGAAGATTTGCAT 529532
Score = 120 bits (132), Expect = 7e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | |||||| || || || ||||||| ||||| ||| ||| || | || ||
Sbjct 530238 AGGACCAAGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTCAATGTGCGACCGTCC 530179
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || || || || || || || || ||||| || || ||||||||||||
Sbjct 530178 TCGAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCT 530119
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| |||||| ||||| || | ||| || |||| || || |||
Sbjct 530118 TGGATCTTGGCCTTGACATTTTCGATAGTGTCAGAAGCTTCGACCTCTAGAGTAATGGTC 530059
Query 225682 T 225682
|
Sbjct 530058 T 530058
>seq126
Length=3090016
Score = 159 bits (176), Expect = 8e-34
Identities = 169/223 (76%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | |||||| | || ||||| || || || |||| ||||| |||| | |||
Sbjct 1376318 ACGAAGACGCAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGT 1376259
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||||||||||||||| || ||||||||||| || || ||||| ||||| || ||
Sbjct 1376258 ACGACCATCTTCTAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCC 1376199
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||| |||||||| || || ||||| ||||| || | ||||| || |
Sbjct 1376198 TTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCGATCGTGTCGGAAGCCTCCACCTCGAG 1376139
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| ||||| ||||||| ||| || | ||| | |||||||
Sbjct 1376138 GGTGATGGTCTTACCCGTCAGAGTCTTGACGAAAATTTGCATT 1376096
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| || ||||| ||| ||| || |||| || || || | | ||| | ||||||
Sbjct 1375767 AGGACGAGATGGAGTGTGCTTTCCTTCTGGATGTTATAGTCAGAGAGAGTACGACCATCT 1375708
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| || ||||| |||||||||||
Sbjct 1375707 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCC 1375648
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| || || || ||||| || | ||| || || | ||||| ||
Sbjct 1375647 TGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGAAGCTTCGACTTCGAGGGTGATGGTT 1375588
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||||||||| || | ||| | |||||
Sbjct 1375587 TTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 1375556
Score = 127 bits (140), Expect = 5e-24
Identities = 127/165 (77%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 225549 AGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608
|||||| |||||||| |||||||| || |||||||| || || || || || || |||||
Sbjct 1375446 AGTTCTGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAAT 1375387
Query 225609 ACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668
||||||||||| |||||||| ||| || ||||||||| || || | ||| || ||
Sbjct 1375386 TCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTTTCGATGGTATCGGAAGCTTCGACCTC 1375327
Query 225669 TAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
| ||||| ||||| || || | |||||| | ||| | ||||||
Sbjct 1375326 GAGAGTGATGGTCTTTCCGGTGAGAGTTTTGACGAAGATTTGCAT 1375282
>seq81
Length=934076
Score = 147 bits (162), Expect = 5e-30
Identities = 147/191 (77%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||| ||| ||||| |||||||| || || || |||| |||||| || | ||| ||
Sbjct 595611 ACGAAGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCAGACAAGGT 595552
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||||||||| |||| ||| || || || ||||| ||
Sbjct 595551 GCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGTCTTTGCTGATCTGGGGGAATTCC 595492
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||| || |||||||| |||||| ||||| ||||| |||| || || || |
Sbjct 595491 TTCCTTATCCTGGATCTTAGCCTTCACGTTCTCGATTGTGTCCGAGGCCTCAACCTCGAG 595432
Query 225672 CGTGATCGTCT 225682
||||| ||||
Sbjct 595431 AGTGATAGTCT 595421
Score = 141 bits (156), Expect = 2e-28
Identities = 146/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||| ||| ||||| |||||||| || || || |||| |||||| || | ||| ||
Sbjct 596151 ACGAAGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCAGACAAGGT 596092
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||||||||| |||| || ||||| || || || ||
Sbjct 596091 GCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGTCTCTGCTGGTCTGGGGGGATTCC 596032
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|| ||||| |||||||| ||| ||| ||||| ||||| |||| ||| || || |
Sbjct 596031 CTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATTGTGTCCGAGGCTTCGACTTCAAG 595972
Query 225672 CGTGATCGTCT 225682
||||| ||||
Sbjct 595971 AGTGATGGTCT 595961
Score = 140 bits (154), Expect = 8e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||||| ||||| | ||| || ||||| || || |||| |||||| || | | ||
Sbjct 595341 ACGAAGTCGGAGGACTAAGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGAGAGGGT 595282
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || |||||||| | || ||| ||||| || ||||| ||
Sbjct 595281 ACGTCCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGGGGAATTCC 595222
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| ||||||||| || || |||||||| || || | || || || |
Sbjct 595221 CTCCTTGTCCTGGATCTTTGCTTTGACGTTCTCGATGGTATCAGAAGCCTCGACTTCAAG 595162
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| ||||||||||| || | ||| | |||||
Sbjct 595161 TGTGATGGTCTTTCCCGTCAAAGTCTTGACGAAGATCTGCAT 595120
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633
||||||||||| |||| || ||||| || ||||| || || ||||| |||||||| |
Sbjct 596567 CCAGCGAAGATGAGTCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCC 596508
Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693
|| ||| ||||| ||||| || | ||| || || | ||||| |||||||| || |
Sbjct 596507 TTGACATTCTCGATTGTGTCCGAAGCTTCGACTTCAAGGGTGATGGTCTTGCCAGTGAGG 596448
Query 225694 GTTTTTATGAACACTTGCATT 225714
||||| | ||| | ||||||
Sbjct 596447 GTTTTCACGAAGATCTGCATT 596427
Score = 86.0 bits (94), Expect = 1e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633
|||||||||||||||| || || || || ||||| || |||||||| |||||||||
Sbjct 594759 CCAGCGAAGATAAGTCTCTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGGATCTTTGCT 594700
Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693
|| || |||||||| || || | || || || | ||||| ||||| || || |
Sbjct 594699 TTGACGTTCTCGATGGTATCAGAAGCCTCGACCTCAAGGGTGATGGTCTTACCGGTTAGG 594640
Query 225694 GTTTTTATGAACACTTGCAT 225713
||||| | ||| | ||||||
Sbjct 594639 GTTTTGACGAAGATTTGCAT 594620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192528281652554
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |