Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq109 125 1e-23 >seq109 Length=1818587 Score = 125 bits (138), Expect = 1e-23 Identities = 334/504 (66%), Gaps = 6/504 (1%) Strand=Plus/Minus Query 75701 AGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTA 75760 || ||||| || || |||||||| || ||||| |||| || | ||| |||| || || Sbjct 201370 AGAAGATGTGGGTTTACAATTTGGAAGTCTCCCGACAGCACACGACGACTGTATATGTTC 201311 Query 75761 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGC 75820 ||| || || || | || || |||||||| | |||||||||||| || ||||| ||| Sbjct 201310 GAGGTGTAGGGCTCAATGGACTCGTTGTTTCCAAGAATTTGAGCAGTCGAGGCAGTGGGC 201251 Query 75821 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTC-TGATTTTATCTTTTAGATA 75879 ||||| |||| || | ||| || | || |||| | ||| |||| || || ||| Sbjct 201250 ATAGGAGCCATCAGCAGACTGTTACGGATTCCAT-TCTTCTTGATCTTCTCGCGAAGAGT 201192 Query 75880 TTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTT 75939 ||| || || | | | ||| ||| |||| | |||| |||| || ||||| || Sbjct 201191 GAGCCAGTCGCATTGGCCAGGCGGTGTAACTCCCCACATATCGAATTGCAGGATTCCTTT 201132 Query 75940 GCTAGCATATGA--TCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAA 75997 | || | || || | || || ||||| | ||| | || || ||||| ||| Sbjct 201131 G-GAG-ACCGGACTGCCCTCGTACGTCTCGTAGGGACCGAGTTGCTCGGCCAGTTCACAA 201074 Query 75998 CTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCT 76057 ||||| | || |||| ||| || || ||||| || ||| || | |||| | ||| Sbjct 201073 GATGCCTCCAGAGCTCCGTGATAGATCGTCTCGAAGATTCGCTTGTTCAAATCTCGGGCT 201014 Query 76058 TCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCA 76117 || || || || || | | | || || ||||| || || ||||| ||||| Sbjct 201013 TCGGGAGAATTGAAGTTGTAGCGCATCAACATGAAAGCATCGGCAAGGCCCTGTACTCCC 200954 Query 76118 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTA 76177 | || || || | ||| | | || ||| | ||||| |||| || ||||||||| Sbjct 200953 AGTCCGATGGGACGATGACGTATGTTTGAATTACGGGCTTCCGGAACCGGATAATAATTA 200894 Query 76178 ATATCTATAATTTTATTGAGATTT 76201 || || || || || || |||||| Sbjct 200893 ATGTCGATGATCTTGTTCAGATTT 200870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932697869120