Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq126 154 3e-32 seq81 136 9e-27 seq109 123 6e-23 >seq126 Length=3090016 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||||||||||||||| || ||||||||||| |||| | ||| | |||||| Sbjct 1376308 AGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCT 1376249 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| || |||||||||||||| | ||||||||| | || ||| |||||||| || Sbjct 1376248 TCTAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCC 1376189 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| |||| | |||| ||| ||| || || || || || || Sbjct 1376188 TGGATCTTGGCTTTGACGTTCTCGATCGTGTCGGAAGCCTCCACCTCGAGGGTGATGGTC 1376129 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| |||||||| ||||| | |||||| Sbjct 1376128 TTACCCGTCAGAGTCTTGACGAAAATTTGCATT 1376096 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| || || || || |||||||| || || | | ||| | |||||| Sbjct 1375767 AGGACGAGATGGAGTGTGCTTTCCTTCTGGATGTTATAGTCAGAGAGAGTACGACCATCT 1375708 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||||| | ||||||||||| || Sbjct 1375707 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCC 1375648 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| ||||| |||| | |||| ||| || ||||| || || || ||| Sbjct 1375647 TGGATCTTTGCCTTGACGTTCTCAATCGTGTCCGAAGCTTCGACTTCGAGGGTGATGGTT 1375588 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| | |||||| ||||||| |||||| Sbjct 1375587 TTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 1375556 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 151940 AGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGAT 151999 |||||| |||||||| || || ||||||||||| || | |||||| |||| | || Sbjct 1375446 AGTTCTGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAAT 1375387 Query 152000 TCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTC 152059 ||||||||| || || || || ||||| | || | | | || ||| || || || Sbjct 1375386 TCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTTTCGATGGTATCGGAAGCTTCGACCTC 1375327 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || |||||||| || ||||||| ||||| Sbjct 1375326 GAGAGTGATGGTCTTTCCGGTGAGAGTTTTGACGAAGATTTGCAT 1375282 >seq81 Length=934076 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || |||||||| ||||||||||| || || |||||||| |||| ||||| | Sbjct 596918 AGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGG 596859 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || | ||| ||||||||||| || ||||||||||| | | ||||||||| Sbjct 596858 CCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGGGGGATTCCTTCT 596799 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || || |||| | |||| || || ||||||||||| Sbjct 596798 TTGTCCTGGATCTTGGCCTTCACGTTCTCGATTGTGTCCGAGGCTTCGACTTCAAGAGTG 596739 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || ||||| ||||||| |||||| Sbjct 596738 ATGGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCAT 596701 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| |||||| | ||||| || || || || || |||||||| |||| ||||| | Sbjct 595109 AGTCGGAGGACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGG 595050 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || | ||| ||||||||||| || ||||||||||| | | ||||| || Sbjct 595049 CCATCCTCCAATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGGGGAATTCCCTCT 594990 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || |||||| |||| | |||| || || |||||||| || Sbjct 594989 TTGTCCTGGATCTTGGCCTTGACATTCTCGATTGTGTCCGAGGCTTCGACTTCAAGGGTG 594930 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || ||||| ||||| || |||||||||| ||||||| Sbjct 594929 ATGGTCTTGCCAGTGAGGGTTTTCACGAAGATCTGCATT 594891 Score = 125 bits (138), Expect = 2e-23 Identities = 161/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| |||||| | ||||| || ||||| || ||||| ||||| || | | || | Sbjct 595337 AGTCGGAGGACTAAGTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGT 595278 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 ||||| || || ||||| ||||||||||| | || |||||||| | | ||||| | Sbjct 595277 CCATCCTCGAGCTGCTTT--CCGGCGAAGATCAATCTTTGCTGGTCTGGGGGAATTCCCT 595220 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || || || ||| |||||| |||| | | | || ||| ||| |||||||| | Sbjct 595219 CCTTGTCCTGGATCTTTGCTTTGACGTTCTCGATGGTATCAGAAGCCTCGACTTCAAGTG 595160 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || ||||| | |||||| ||||||| |||||| Sbjct 595159 TGATGGTCTTTCCCGTCAAAGTCTTGACGAAGATCTGCAT 595120 Score = 102 bits (112), Expect = 2e-16 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || |||||||| ||||||||||| || ||||| ||||| || | || || | Sbjct 596147 AGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCAGACAAGGTGCGG 596088 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 ||||| || || ||||| || |||||||| || ||||||||||| | | |||||| | Sbjct 596087 CCATCCTCGAGCTGCTTT--CCAGCGAAGATGAGTCTCTGCTGGTCTGGGGGGATTCCCT 596030 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 | || || || || || |||||| |||| | |||| || || |||||||||| Sbjct 596029 CTTTGTCCTGGATCTTGGCCTTGACATTCTCGATTGTGTCCGAGGCTTCGACTTCAAGAG 595970 Query 152065 TAATAGT 152071 | || || Sbjct 595969 TGATGGT 595963 Score = 93.3 bits (102), Expect = 1e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 |||| | || |||||||| || ||||||||||| | | ||||| || || || || | Sbjct 596575 GGCTCTCACCAGCGAAGATGAGTCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGGA 596516 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| |||| | |||| ||| || |||||||| || || || |||| Sbjct 596515 TCTTGGCCTTGACATTCTCGATTGTGTCCGAAGCTTCGACTTCAAGGGTGATGGTCTTGC 596456 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| || |||||||||| ||||||| Sbjct 596455 CAGTGAGGGTTTTCACGAAGATCTGCATT 596427 Score = 89.7 bits (98), Expect = 1e-12 Identities = 133/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| || |||||||| ||||||||||| || ||||| ||||| || | || || | Sbjct 595607 AGTCGCAGAACAAGATGGAGAGTAGACTCCTTCTGGATATTGTAGTCAGACAAGGTGCGG 595548 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 ||||| || || ||||| || |||||||| || || ||||| || | | ||||||| Sbjct 595547 CCATCCTCGAGCTGCTTT--CCAGCGAAGATGAGTCTTTGCTGATCTGGGGGAATTCCTT 595490 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || || || || || || |||| | |||| || ||| || || |||| Sbjct 595489 CCTTATCCTGGATCTTAGCCTTCACGTTCTCGATTGTGTCCGAGGCCTCAACCTCGAGAG 595430 Query 152065 TAATAGT 152071 | ||||| Sbjct 595429 TGATAGT 595423 >seq109 Length=1818587 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| ||||| ||||| || ||||| || |||||||| ||||| |||| | ||||| Sbjct 529977 AGTCGCAGGACGAGATGGAGCGTAGATTCCTTTTGGATATTGTAGTCGGACAGCGTTCTT 529918 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| | || || |||||||| || | ||||| || | | ||||||||| Sbjct 529917 CCATCTTCCAACTGCTTGCCTGCGAAGATCAGACGTTGCTGATCGGGAGGAATTCCTTCC 529858 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || |||||| | || | |||| || || ||||| |||||| Sbjct 529857 TTGTCCTGGATCTTAGCTTTGACGTTTTCAATAGTGTCGGAGGCTTCGACTTCGAGAGTA 529798 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || |||||||||| |||||| Sbjct 529797 ATCGTCTTCCCAGTGAGCGTTTTCACGAAGATCTGCAT 529760 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || |||||||| || || ||||||||||||||| | || | || || Sbjct 529743 AGGACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGCTCAGTGTGCGACCGTCC 529684 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| || || | | |||||| || | | |||||||||||| ||| Sbjct 529683 TCGAGCTGCTTGCCGGCAAAAATCAAACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCT 529624 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | |||| ||| ||| ||||| || || |||||| Sbjct 529623 TGGATCTTGGCCTTGACATTTTCGATAGTGTCAGAAGCCTCGACTTCGAGGGTGATAGTT 529564 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| || ||||||| ||||| Sbjct 529563 TTTCCGGTGAGAGTTTTGACGAAGATTTGCAT 529532 Score = 84.2 bits (92), Expect = 5e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || || |||||||| |||||||||||||| ||| || || | || || Sbjct 530238 AGGACCAAGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTCAATGTGCGACCGTCC 530179 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| || || || | |||||| || | | |||||||||||| ||| Sbjct 530178 TCGAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCT 530119 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || |||||| | || | |||| ||| || || || |||||||| || Sbjct 530118 TGGATCTTGGCCTTGACATTTTCGATAGTGTCAGAAGCTTCGACCTCTAGAGTAATGGT 530060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153817976384161