Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20tipulae_20[genbank_20GCA_5F900184235.1_202017-05-22] 191 sequences; 59,468,623 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq109 125 5e-24 seq126 123 2e-23 seq81 107 1e-18 seq76 86.0 5e-12 >seq109 Length=1818587 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || ||||| ||||||||||||||| ||| ||| |||| || Sbjct 529740 ACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGCTCAGTGTGCGACCGTCCTCG 529681 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| |||||||| ||||||||||||||||| | ||| | |||||||| || Sbjct 529680 AGCTGCTTGCCGGCAAAAATCAAACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCTTGG 529621 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | || | || ||||| | | || || || | || || || ||| Sbjct 529620 ATCTTGGCCTTGACATTTTCGATAGTGTCAGAAGCCTCGACTTCGAGGGTGATAGTTTTT 529561 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| || || |||||||||||||| Sbjct 529560 CCGGTGAGAGTTTTGACGAAGATTTGCAT 529532 Score = 125 bits (138), Expect = 5e-24 Identities = 171/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | |||| || || || || ||||| ||||||||||| ||||| Sbjct 529993 TTGCATACCTCCGCGAAGTCGCAGGACGAGATGGAGCGTAGATTCCTTTTGGATATTGTA 529934 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| || | | || |||| |||||| || || ||||||| ||| |||||||| Sbjct 529933 GTCGGACAGCGTTCTTCCATCTTCCAACTGCTTGCCTGCGAAGATCAGACGTTGCTGATC 529874 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | ||| | |||||||| ||| ||||| |||| | ||| | || ||||||| || Sbjct 529873 GGGAGGAATTCCTTCCTTGTCCTGGATCTTA-GCTTTGACGTTTTCAATAGTGTCGGAGG 529815 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || || | ||||||||||| || ||||| || ||||||||||| |||||| Sbjct 529814 CTTCGACTTCGAGAGTAATCGTCTTCCCAGTGAGCGTTTTCACGAAGATCTGCATG 529759 Score = 100 bits (110), Expect = 2e-16 Identities = 129/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||||||||||||||| ||| | | ||| |||| || Sbjct 530235 ACCAAGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTCAATGTGCGACCGTCCTCG 530176 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| |||||||| |||| |||||||||||| | ||| | |||||||| || Sbjct 530175 AGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCTTGG 530116 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | || | || ||||| | | ||| ||||| | ||||| |||| Sbjct 530115 ATCTTGGCCTTGACATTTTCGATAGTGTCAGAAGCTTCGACCTCTAGAGTAATGGTCT 530058 Score = 96.9 bits (106), Expect = 2e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||||||||||||||| ||| ||| ||| | || ||||||||||| |||||||| Sbjct 530488 CTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCAAA 530429 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | | ||||||||| | ||| | ||||| || ||| ||||| ||| | | Sbjct 530428 GATGAGTCTCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTT 530369 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 | | |||||||| | | ||| ||||||| || || |||| Sbjct 530368 TTCAATGGTGTCCGAAGCTTCGACCTCCAGGGTGATAGTCT 530328 >seq126 Length=3090016 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| || |||||| ||||||||||| |||| ||| || | || || Sbjct 1376305 ACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCATCTTCT 1376246 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | || | |||||||| ||| Sbjct 1376245 AGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGG 1376186 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | |||| | || ||||||| | |||||||| | || || ||||| Sbjct 1376185 ATCTT-GGCTTTGACGTTCTCGATCGTGTCGGAAGCCTCCACCTCGAGGGTGATGGTCTT 1376127 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || ||||| ||||| |||||||| Sbjct 1376126 ACCCGTCAGAGTCTTGACGAAAATTTGCAT 1376097 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || || |||||||| ||||| ||||| | |||||||||||| | || | |||||||| Sbjct 1375436 TCTTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATTCCTTCCTTG 1375377 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 ||| ||||| ||| | || | ||||| |||| | ||| ||||| | || || Sbjct 1375376 TCCTGGATCTTGGCCTTGACGTTTTCGATGGTATCGGAAGCTTCGACCTCGAGAGTGATG 1375317 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| ||||| || || |||||||||||||| Sbjct 1375316 GTCTTTCCGGTGAGAGTTTTGACGAAGATTTGCAT 1375282 >seq81 Length=934076 Score = 107 bits (118), Expect = 1e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 44134 GTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTG 44193 |||||| ||| |||||| ||||| ||||| || | ||| || | || || ||||| Sbjct 595323 GTGAAGGGTGGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGTCCATCCTCGAGCTG 595264 Query 44194 CTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTT 44253 ||| ||||| |||||||| | ||||| |||| || | || ||||| ||| ||||| Sbjct 595263 CTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTT 595204 Query 44254 CTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCG 44312 ||||| | |||| | ||||| || | | || || || | || || |||||||||| Sbjct 595203 -TGCTTTGACGTTCTCGATGGTATCAGAAGCCTCGACTTCAAGTGTGATGGTCTTTCCCG 595145 Query 44313 TGAGGGTCTTCACGAAGATTTGCATG 44338 | | ||||| |||||||| |||||| Sbjct 595144 TCAAAGTCTTGACGAAGATCTGCATG 595119 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| ||||||||||| || | || || || || ||| Sbjct 597137 ACCACGTGAAGGGTAGACTCCTTCTGGATGTTGTACTCAGACAGGGTACGATCATCTTCC 597078 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||||||||||| |||||| | ||| |||| | || ||| | || Sbjct 597077 AACTGCTTTCCGGCAAAGATCAGACGCTGTTCATCAAAAGGAATTCCCTCCATGTCGAAG 597018 Query 44249 ATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | |||| | | |||||| | | || || ||| | | ||||| Sbjct 597017 ATCTTGGCCTTC-AGGTTCATGACGGTGTCAGAAGCCTCAACATCCGGGATGAGGGTCTT 596959 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || ||||||||||||||||| ||||| Sbjct 596958 TCCAGTAAGGGTCTTCACGAAGATCTGCAT 596929 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| ||||| || |||||||| |||| | ||| | || ||| Sbjct 595100 ACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCC 595041 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | || || ||||| ||||| | | |||||| |||| || | || || || ||| Sbjct 595040 AATTGTTTGCCGGCGAAGATGAGTCTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGG 594981 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | || ||| || || | || || ||||| Sbjct 594980 ATCTTGGCCTTGACATTCTCGATTGTGTCCGAGGCTTCGACTTCAAGGGTGATGGTCTTG 594921 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||| ||||||||||| ||||| Sbjct 594920 CCAGTGAGGGTTTTCACGAAGATCTGCAT 594892 >seq76 Length=529262 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 ||||| ||||||||||||||||| || | || | || ||||| ||| ||||| | Sbjct 255869 CCGGCGAAGATCAAACGCTGCTGGTCAGGGGGAATTCCCTCCTTATCCTGGATCTTGGCC 255928 Query 44258 TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGG 44317 |||| | | ||||| || | || || ||||| | || || ||||| || || || Sbjct 255929 TTCACATTCTCAATGGTATCAGAGGCCTCGACCTCGAGGGTGATAGTCTTACCGGTCAGA 255988 Query 44318 GTCTTCACGAAGATTTGCATGA 44339 |||||||||||||| ||||||| Sbjct 255989 GTCTTCACGAAGATCTGCATGA 256010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989562009847