Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq319 102 2e-16 seq585 95.1 2e-14 >seq319 Length=516904 Score = 102 bits (112), Expect = 2e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980 || || || || || || || |||||||| || || | |||||| |||| |||||| || Sbjct 271973 GCTTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGGTCCTTCGCAGCCATCTTCTGGCTC 271914 Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040 ||| | | ||| | |||| ||||| ||| |||||||||| |||| || | || || Sbjct 271913 AAGGAACGCGGTCTCATGCCCGGTCTGACCCACTCCAATGAGCTCATCTCCCGTGATGAG 271854 Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAA 102076 || ||||||||||||||||| || | |||| ||| Sbjct 271853 GGCCTTCATCGCGACTTTGCTTGTCTTATGTTCAAA 271818 >seq585 Length=222271 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980 ||||| || || || || || |||||||| || || | || || |||| |||||| | Sbjct 95329 GCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGGTCCTTTGCGGCCATCTTCTGGCTT 95270 Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040 ||| | | ||| | |||| ||||| ||| |||||||||| ||||||| | || || Sbjct 95269 AAGGAACGCGGTCTCATGCCCGGTCTGACCCACTCCAATGAGCTCATTTCCCGTGATGAG 95210 Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAA 102075 || ||||||||||| ||||| ||| | |||| || Sbjct 95209 GGCCTTCATCGCGATTTTGCTTGCCTCATGTTCAA 95175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989572081697700