Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panagrellus_20redivivus_20[genbank_20GCA_5F000341325.1_202013-02-22] 940 sequences; 65,093,147 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq97 168 9e-37 >seq97 Length=72787 Score = 168 bits (186), Expect = 9e-37 Identities = 629/974 (65%), Gaps = 29/974 (3%) Strand=Plus/Minus Query 65568 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 65627 || || || || |||||||| || | ||| | ||| || || ||||||| || || | Sbjct 70106 CCCTGGACGCCGATACCGATGGGACGATGGCGCTTGTTCGACTTTTCAGCCTCCGGGACG 70047 Query 65628 GGATAATAATTAATATCTATAATTTTATTGAGATTTCT----GACAATTACTTTGACCAC 65683 || ||||| || || || || || || || | | |||| |||| | ||| | || Sbjct 70046 GGGTAATAGTTGATGTCGATGATCTTGTTCA-AGTTCTTGGTGACAGT--CTTCGTG-AC 69991 Query 65684 ATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTATT-------ACAAACATGTTCAATG 65736 | |||||| ||| ||||| ||| ||| | || || || |||||| | Sbjct 69990 AGCCTTCAACTTGTTGAAATCGAAT---TCA-CGGTTGGGGCCGACGAAGCGGTTCAACG 69935 Query 65737 CAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAG 65796 | | || |||||||| || ||||| ||||||| || | |||| | || || | Sbjct 69934 CGATCGACGCCAGATTGCAGACGGCGACCTCATCAGGGGCGCTGTATTCGACGATTTCGG 69875 Query 65797 TGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 65856 |||| || || || || ||||| ||||| | || || || || ||||| ||| || | Sbjct 69874 TGCACAGGTTGCTGCATTTGATCGTTCCGAGGTTCTGCTGGTTGCTCTTACGGTTGCAGG 69815 Query 65857 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 65916 | || || ||||| ||| | || || |||||||| | |||| || || |||| Sbjct 69814 CGTCTTTGTAAAGCATGTAGGGGGTGCCAGTTTCGACTTGAGCGCTGATGATGTGCTTCC 69755 Query 65917 AGACGACTCGAGCCTTTATTATAGATTT--GTATCTCTTTTCTCTTTCGTATAGTGTATA 65974 ||| | |||||||| || | ||| | | | ||| || |||||| || || Sbjct 69754 AGAGATCGCGAGCCTTGATCT--GCTTTCGGAAACGCTTCTCCGACTCGTATTTCGTGTA 69697 Query 65975 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACAT 66034 | ||||||| || ||||| | || | || || || || | || ||||| Sbjct 69696 GAGCTCCTCGAACTTCTCGCCCCAGCAGTCCTCAAGACCGGGGCACTCGTGGGGGCACAT 69637 Query 66035 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 66094 || ||||| ||||| | ||| || ||||| || ||||| || ||||| ||||| Sbjct 69636 CAGAGACCAGGTGCCGTCGGTTTCCACGCGCTTCATGAAAAGATCGGGGATCCAGAGAGC 69577 Query 66095 TATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 66153 ||| || | ||| | || | | |||||| || |||||| || | ||| | || Sbjct 69576 -ATAGAAGAGATCACGGGCACGCTCTTCCTCAGCACCACGATTCTTCTTCATATCCATGA 69518 Query 66154 ACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 66213 | | | || || ||||||||||| | ||| ||||| | | | ||||| || |||| Sbjct 69517 CCTCAAAGATGTCTGCGTGCCACGGTTCGAGGTAGATGGCGAAAGCGCCAGGACGCTTGT 69458 Query 66214 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 66273 |||| |||||||| | ||| | ||| ||||| || | || | | ||| || | || | Sbjct 69457 TTCCGCCCTGATCGACGTAGCGAGCAGTGTTGTTGAATACACGGAGCATCGGGACAAGGC 69398 Query 66274 CATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTA--AT 66331 ||||||| || ||| || | || | | |||| | ||||| || || | || Sbjct 69397 CATTGGAGACTCCGCCGGTACCAGCAATGTGGGATCCAGTGGCACGGATGTTGTGAACAT 69338 Query 66332 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 66391 || || || || || || || || ||||| ||||||| | || || || || | Sbjct 69337 TG--AGCCCAATGCCGCCGGCTGACTTTGAGATCTTTGCGCATTGCTTCAATGTGTCGAA 69280 Query 66392 GATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 66451 ||||| || || || |||||| ||| | || | || ||| ||||| || | || Sbjct 69279 AATGCCATCGATGCTGTCATCCGACATAGTTAGCAAGAAGCAGGACGACATCTGAGGCCG 69220 Query 66452 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 66511 | || |||||||| || | || || | || || || ||||| || || | || Sbjct 69219 AGGGGTACCCGCATTGAACAGAGTGGGCGTGGCATGGGTGAACCAGCGCTCGGACATGAG 69160 Query 66512 ATTGTACGTCTCAA 66525 |||||| |||| || Sbjct 69159 ATTGTAGGTCTGAA 69146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658165066469600